Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC112206.4-201ENST00000515142 405 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 IGKV1D-22-201ENST00000518953 324 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC074029.2-201ENST00000551045 634 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 DPPA3P2-202ENST00000557188 1219 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC007114.2-201ENST00000576014 4281 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AL512283.1-201ENST00000606756 1384 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 AC005261.6-201ENST00000623072 1387 ntBASIC6.31□□□□□ -1.4
HMGB4Q8WW32 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGB4Q8WW32 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 MAPK10-270ENST00000641102 3538 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 CYP2G2P-201ENST00000594920 1485 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 TMSB4XP4-201ENST00000323496 618 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 RNU1-24P-201ENST00000364285 165 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 CCNB2P1-201ENST00000399411 1150 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AL451046.1-201ENST00000406097 534 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AL023284.3-201ENST00000407767 334 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 RNA5SP156-201ENST00000410250 110 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 RPL36P18-201ENST00000419316 318 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC026254.2-201ENST00000475295 371 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC114781.3-201ENST00000512083 142 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 Y_RNA.667-201ENST00000516212 107 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AL158211.2-201ENST00000607282 395 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 MIR6886-201ENST00000619864 61 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC074276.2-201ENST00000619891 348 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC021766.1-201ENST00000624404 741 ntBASIC6.3□□□□□ -1.4
HMGB4Q8WW32 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HMGB4Q8WW32 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGB4Q8WW32 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms