Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC137056.2-201ENST00000624055 1958 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 RN7SKP130-201ENST00000364924 301 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 SNORD116-4-201ENST00000384733 96 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 SNORA40.2-201ENST00000390847 128 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 RPS7P12-201ENST00000422385 582 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 TNPO1P1-201ENST00000423641 1138 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC000089.1-201ENST00000424559 801 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC018804.1-201ENST00000430381 618 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC234771.3-201ENST00000454984 622 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 RPL31P3-201ENST00000458430 332 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC026348.1-201ENST00000462549 1053 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 RPS3AP43-201ENST00000479743 781 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 OR5H4P-201ENST00000510851 923 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 RNA5SP287-201ENST00000516358 103 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AP005597.2-201ENST00000526238 341 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL390877.1-201ENST00000605704 214 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL021368.3-201ENST00000607119 578 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL392048.1-201ENST00000613946 534 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 VN1R7P-201ENST00000619242 903 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC067852.7-201ENST00000623270 535 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AP000676.3-201ENST00000623299 569 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC011471.4-201ENST00000638271 216 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC006927.3-201ENST00000638789 384 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 RNU1-5P-201ENST00000362684 144 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 SNORD116.1-201ENST00000365628 92 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 SNORD116-9-201ENST00000384000 95 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 SNORD116-3-201ENST00000384287 95 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 SNORD116-7-201ENST00000384404 95 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 SNORD116-5-201ENST00000384462 95 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 MIR621-201ENST00000384919 96 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AC245036.1-201ENST00000391727 309 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 USP9YP26-201ENST00000421008 661 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 RPL7P53-201ENST00000421245 739 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 MOB1AP1-201ENST00000430903 535 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 FGF7P5-201ENST00000441829 291 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 RN7SL390P-201ENST00000470634 284 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 RN7SL70P-201ENST00000478322 302 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 RN7SL88P-201ENST00000480166 299 ntBASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS4Q8IUM7 IGKV2D-38-201ENST00000518423 240 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms