Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC061975.5-201ENST00000584928 1441 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 SNORA64.3-201ENST00000365647 134 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 VIM2P-201ENST00000402383 1294 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 RN7SKP142-201ENST00000411236 328 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC098592.1-201ENST00000419352 333 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 RPL5P10-201ENST00000445207 894 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 RPS6P4-201ENST00000494693 758 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC096751.1-202ENST00000502691 1067 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 PGAM4P2-201ENST00000512491 721 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 RN7SKP196-201ENST00000516267 345 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 NDUFS5P6-201ENST00000529136 295 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 OR9G2P-201ENST00000533326 880 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC022662.1-201ENST00000580252 331 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC005034.4-201ENST00000603612 899 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 WBP1LP12-201ENST00000604449 331 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AL499605.1-201ENST00000604628 403 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 AC090517.2-201ENST00000614966 680 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RC3H1Q5TC82 LRRC37A15P-201ENST00000514785 1355 ntBASIC8.99□□□□□ -0.97
RC3H1Q5TC82 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 ODF3-202ENST00000342593 386 ntTSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 RNU5B-1-201ENST00000363286 116 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 C1DP2-201ENST00000418167 426 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 FNDC3CP-201ENST00000420795 1155 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 COX7BP2-201ENST00000437976 242 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 HMGB3P6-201ENST00000444896 598 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 TPMTP4-201ENST00000450749 678 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 PDCL3P4-201ENST00000489621 720 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 IGLVV-66-201ENST00000523818 341 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 OR8I1P-201ENST00000529291 931 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC087897.1-201ENST00000550134 156 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 OR11H3P-201ENST00000554547 982 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC007346.1-201ENST00000569208 867 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC096708.2-201ENST00000577676 512 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.98□□□□□ -0.97
RC3H1Q5TC82 IMMP1LP1-201ENST00000605170 488 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 NDUFA8P1-201ENST00000605525 367 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AL683826.1-201ENST00000624104 627 ntBASIC8.98□□□□□ -0.97
RC3H1Q5TC82 AC073593.1-201ENST00000624500 411 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms