Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC58Q4VC31 TCP1P3-201ENST00000414406 1498 ntBASIC5.36□□□□□ -1.55
CCDC58Q4VC31 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC58Q4VC31 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCDC58Q4VC31 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC58Q4VC31 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC58Q4VC31 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC58Q4VC31 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCDC58Q4VC31 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC58Q4VC31 AL031595.2-201ENST00000624215 19071 ntBASIC5.36□□□□□ -1.55
CCDC58Q4VC31 AC009962.1-201ENST00000567327 3813 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 RNA5SP308-201ENST00000362532 115 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 OOSP1-201ENST00000398992 1270 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 POU5F1P5-201ENST00000445059 658 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 RSU1P1-201ENST00000453416 441 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC079080.1-201ENST00000479841 822 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 OR4D12P-201ENST00000509361 911 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 RN7SKP64-201ENST00000517206 328 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC130366.1-201ENST00000526505 1192 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 OR4A43P-201ENST00000532938 908 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 PSMC1P8-201ENST00000536820 1296 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC007346.2-201ENST00000564816 892 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 WBP1LP11-201ENST00000586141 328 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AL591167.1-201ENST00000607321 456 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 MIR6726-201ENST00000613751 61 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 BNIP3P41-202ENST00000616656 861 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AL137141.1-201ENST00000624622 4836 ntBASIC5.35□□□□□ -1.55
CCDC58Q4VC31 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC58Q4VC31 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 SAMMSON-213ENST00000641336 1521 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 PCAT14-202ENST00000627127 3935 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC024587.1-201ENST00000505925 2157 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC002127.1-201ENST00000421305 225 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AP003385.1-201ENST00000426387 893 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 GTF2IP14-201ENST00000441415 586 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 RPS10P18-201ENST00000442662 495 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AL133480.2-201ENST00000456723 487 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 RN7SL350P-201ENST00000492591 299 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 RPSAP51-201ENST00000497462 645 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 OR8Q1P-201ENST00000526467 655 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AL353807.4-201ENST00000604995 257 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 FAM72A-208ENST00000607379 1139 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC117503.3-201ENST00000623811 601 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 AC079776.5-201ENST00000641920 211 ntBASIC5.34□□□□□ -1.55
CCDC58Q4VC31 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC58Q4VC31 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms