Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC242843.1-201ENST00000618702 573 ntBASIC7.77□□□□□ -1.17
COL16A1Q07092 AC002090.1-201ENST00000625000 2138 ntBASIC7.77□□□□□ -1.17
COL16A1Q07092 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL16A1Q07092 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.77□□□□□ -1.17
COL16A1Q07092 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL16A1Q07092 MAPK10-338ENST00000641647 3362 ntBASIC7.77□□□□□ -1.17
COL16A1Q07092 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL16A1Q07092 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL16A1Q07092 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL16A1Q07092 ZNF101P1-201ENST00000435701 1720 ntBASIC7.77□□□□□ -1.17
COL16A1Q07092 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
COL16A1Q07092 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 AC011493.1-201ENST00000596753 1632 ntBASIC7.76□□□□□ -1.17
COL16A1Q07092 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
COL16A1Q07092 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
COL16A1Q07092 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 AC232271.1-201ENST00000602455 2715 ntBASIC7.76□□□□□ -1.17
COL16A1Q07092 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
COL16A1Q07092 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.76□□□□□ -1.17
COL16A1Q07092 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.76□□□□□ -1.17
COL16A1Q07092 DSTNP5-201ENST00000427921 523 ntBASIC7.76□□□□□ -1.17
COL16A1Q07092 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.76□□□□□ -1.17
COL16A1Q07092 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC7.76□□□□□ -1.17
COL16A1Q07092 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
COL16A1Q07092 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.76□□□□□ -1.17
COL16A1Q07092 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL16A1Q07092 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.76□□□□□ -1.17
COL16A1Q07092 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL16A1Q07092 AC110597.1-201ENST00000562669 3176 ntBASIC7.75□□□□□ -1.17
COL16A1Q07092 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
COL16A1Q07092 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL16A1Q07092 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.75□□□□□ -1.17
COL16A1Q07092 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL16A1Q07092 AC068138.1-201ENST00000412635 217 ntBASIC7.75□□□□□ -1.17
COL16A1Q07092 COX6CP17-201ENST00000421389 185 ntBASIC7.75□□□□□ -1.17
COL16A1Q07092 AC092647.3-201ENST00000443044 633 ntBASIC7.75□□□□□ -1.17
COL16A1Q07092 AC024255.1-201ENST00000614376 102 ntBASIC7.75□□□□□ -1.17
COL16A1Q07092 AL353662.3-201ENST00000625131 237 ntBASIC7.75□□□□□ -1.17
COL16A1Q07092 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.75□□□□□ -1.17
COL16A1Q07092 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.75□□□□□ -1.17
COL16A1Q07092 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL16A1Q07092 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL16A1Q07092 AC011369.2-201ENST00000624423 1567 ntBASIC7.75□□□□□ -1.17
COL16A1Q07092 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL16A1Q07092 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
COL16A1Q07092 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
COL16A1Q07092 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
COL16A1Q07092 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.75□□□□□ -1.17
COL16A1Q07092 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL16A1Q07092 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
COL16A1Q07092 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.74□□□□□ -1.17
COL16A1Q07092 AC093162.1-201ENST00000419682 124 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 AC019205.1-201ENST00000421830 730 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.74□□□□□ -1.17
COL16A1Q07092 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 AC112187.1-201ENST00000455837 479 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.74□□□□□ -1.17
COL16A1Q07092 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.74□□□□□ -1.17
COL16A1Q07092 AC069307.1-201ENST00000602820 447 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.74□□□□□ -1.17
COL16A1Q07092 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.74□□□□□ -1.17
COL16A1Q07092 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.74□□□□□ -1.17
COL16A1Q07092 MFSD8-218ENST00000641186 4448 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.74□□□□□ -1.17
COL16A1Q07092 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 AC105749.1-201ENST00000631338 2008 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.74□□□□□ -1.17
COL16A1Q07092 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.74□□□□□ -1.17
COL16A1Q07092 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 AL662795.2-201ENST00000624252 3706 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.74□□□□□ -1.17
COL16A1Q07092 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC7.74□□□□□ -1.17
COL16A1Q07092 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC7.74□□□□□ -1.17
COL16A1Q07092 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.74□□□□□ -1.17
COL16A1Q07092 RNU6-941P-201ENST00000516346 108 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.74□□□□□ -1.17
COL16A1Q07092 AC068831.8-201ENST00000620171 435 ntBASIC7.74□□□□□ -1.17
COL16A1Q07092 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
COL16A1Q07092 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
COL16A1Q07092 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL16A1Q07092 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms