Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.98□□□□□ -1.61
LMO4P61968 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.98□□□□□ -1.61
LMO4P61968 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LMO4P61968 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.98□□□□□ -1.61
LMO4P61968 SNRPGP1-201ENST00000553864 222 ntBASIC4.98□□□□□ -1.61
LMO4P61968 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 AC006530.1-201ENST00000555980 571 ntBASIC4.98□□□□□ -1.61
LMO4P61968 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 AC093524.1-201ENST00000564266 1094 ntBASIC4.98□□□□□ -1.61
LMO4P61968 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.98□□□□□ -1.61
LMO4P61968 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 AC067852.5-201ENST00000589299 310 ntBASIC4.98□□□□□ -1.61
LMO4P61968 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.98□□□□□ -1.61
LMO4P61968 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 NEPNP-201ENST00000404786 1371 ntBASIC4.98□□□□□ -1.61
LMO4P61968 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 AL078595.2-201ENST00000605309 1780 ntBASIC4.98□□□□□ -1.61
LMO4P61968 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC4.98□□□□□ -1.61
LMO4P61968 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LMO4P61968 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC4.97□□□□□ -1.61
LMO4P61968 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 DOCK11P1-201ENST00000553480 5932 ntBASIC4.97□□□□□ -1.61
LMO4P61968 AC092724.1-201ENST00000624623 3397 ntBASIC4.97□□□□□ -1.61
LMO4P61968 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC4.97□□□□□ -1.61
LMO4P61968 AL137058.3-201ENST00000624531 3099 ntBASIC4.97□□□□□ -1.61
LMO4P61968 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
LMO4P61968 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.97□□□□□ -1.61
LMO4P61968 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LMO4P61968 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC4.97□□□□□ -1.61
LMO4P61968 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LMO4P61968 OR7E101P-201ENST00000400428 513 ntBASIC4.97□□□□□ -1.61
LMO4P61968 AC016739.1-201ENST00000405359 345 ntBASIC4.97□□□□□ -1.61
LMO4P61968 PTCD2P2-201ENST00000415579 1095 ntBASIC4.97□□□□□ -1.61
LMO4P61968 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.97□□□□□ -1.61
LMO4P61968 NMD3P2-201ENST00000421815 761 ntBASIC4.97□□□□□ -1.61
LMO4P61968 AC013410.2-201ENST00000422627 201 ntBASIC4.97□□□□□ -1.61
LMO4P61968 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.97□□□□□ -1.61
LMO4P61968 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.97□□□□□ -1.61
LMO4P61968 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
LMO4P61968 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.97□□□□□ -1.61
LMO4P61968 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.97□□□□□ -1.61
LMO4P61968 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.97□□□□□ -1.61
LMO4P61968 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.97□□□□□ -1.61
LMO4P61968 AC008676.3-201ENST00000521237 435 ntBASIC4.97□□□□□ -1.61
LMO4P61968 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.97□□□□□ -1.61
LMO4P61968 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.97□□□□□ -1.61
LMO4P61968 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.97□□□□□ -1.61
LMO4P61968 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.97□□□□□ -1.61
LMO4P61968 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.97□□□□□ -1.61
LMO4P61968 AC020978.7-201ENST00000575953 1187 ntBASIC4.97□□□□□ -1.61
LMO4P61968 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LMO4P61968 AC009237.12-201ENST00000604755 742 ntBASIC4.97□□□□□ -1.61
LMO4P61968 RPL12P48-201ENST00000605620 304 ntBASIC4.97□□□□□ -1.61
LMO4P61968 AC092574.1-201ENST00000609771 420 ntBASIC4.97□□□□□ -1.61
LMO4P61968 AP000894.4-201ENST00000610185 483 ntBASIC4.97□□□□□ -1.61
LMO4P61968 AL021918.2-201ENST00000613415 194 ntBASIC4.97□□□□□ -1.61
LMO4P61968 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.97□□□□□ -1.61
LMO4P61968 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
LMO4P61968 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.97□□□□□ -1.61
LMO4P61968 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC4.97□□□□□ -1.61
LMO4P61968 KCNMB3P1-202ENST00000493696 3389 ntBASIC4.97□□□□□ -1.61
LMO4P61968 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.97□□□□□ -1.61
LMO4P61968 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC4.97□□□□□ -1.61
LMO4P61968 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.97□□□□□ -1.61
LMO4P61968 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
LMO4P61968 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LMO4P61968 LINC01616-201ENST00000561816 2280 ntBASIC4.97□□□□□ -1.61
LMO4P61968 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms