Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.43□□□□□ -1.38
GFRA1P56159 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.43□□□□□ -1.38
GFRA1P56159 AP000619.3-201ENST00000535634 1127 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.43□□□□□ -1.38
GFRA1P56159 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.43□□□□□ -1.38
GFRA1P56159 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC6.43□□□□□ -1.38
GFRA1P56159 AC012213.3-201ENST00000577199 777 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 RN7SL426P-201ENST00000579106 295 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.43□□□□□ -1.38
GFRA1P56159 DEFB131E-202ENST00000602581 683 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 AC125494.3-201ENST00000602759 455 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 AC080078.2-201ENST00000603766 501 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 AC010738.1-201ENST00000604970 987 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 STMN1P1-201ENST00000617809 440 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 AC022509.4-201ENST00000621404 572 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.43□□□□□ -1.38
GFRA1P56159 AF246928.1-201ENST00000623768 87 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.43□□□□□ -1.38
GFRA1P56159 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 AL358913.2-201ENST00000553881 1548 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 AC011503.2-201ENST00000594230 1500 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.43□□□□□ -1.38
GFRA1P56159 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.43□□□□□ -1.38
GFRA1P56159 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.43□□□□□ -1.38
GFRA1P56159 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.43□□□□□ -1.38
GFRA1P56159 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
GFRA1P56159 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
GFRA1P56159 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 MTND4P26-201ENST00000415971 1359 ntBASIC6.43□□□□□ -1.38
GFRA1P56159 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.43□□□□□ -1.38
GFRA1P56159 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.43□□□□□ -1.38
GFRA1P56159 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GFRA1P56159 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.43□□□□□ -1.38
GFRA1P56159 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC005261.2-201ENST00000593427 4258 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 FLJ42393-201ENST00000623801 2270 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
GFRA1P56159 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
GFRA1P56159 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 RN7SKP55-201ENST00000364888 307 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 RNA5SP53-201ENST00000391299 120 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 RNU1-56P-201ENST00000391303 164 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 MRPL32P1-201ENST00000406301 247 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 Y_RNA.599-201ENST00000410489 109 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 RN7SKP254-201ENST00000410685 310 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.42□□□□□ -1.38
GFRA1P56159 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 MYO5BP3-201ENST00000431872 1279 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AC129850.1-201ENST00000436203 508 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AC234064.1-201ENST00000436312 247 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 RPSAP40-201ENST00000442343 891 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 MTND2P19-201ENST00000449129 1012 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AL133480.2-201ENST00000456723 487 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 PSMC1P13-201ENST00000458195 985 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC021205.1-201ENST00000468797 348 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.42□□□□□ -1.38
GFRA1P56159 MTND3P5-201ENST00000512798 333 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AC093755.1-201ENST00000512950 1023 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AC008494.2-201ENST00000514544 370 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 RN7SKP233-201ENST00000517005 110 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.42□□□□□ -1.38
GFRA1P56159 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 AC109635.6-201ENST00000525487 1113 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.42□□□□□ -1.38
GFRA1P56159 ACTR3BP3-201ENST00000565577 979 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms