Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPS3P2-201ENST00000421346 701 ntBASIC6.96□□□□□ -1.3
NEDD4P46934 AL365220.1-201ENST00000432923 399 ntBASIC6.96□□□□□ -1.3
NEDD4P46934 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.96□□□□□ -1.3
NEDD4P46934 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.96□□□□□ -1.3
NEDD4P46934 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NEDD4P46934 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.96□□□□□ -1.3
NEDD4P46934 AC004129.2-201ENST00000457229 287 ntBASIC6.96□□□□□ -1.3
NEDD4P46934 AC094085.1-201ENST00000468914 584 ntBASIC6.96□□□□□ -1.3
NEDD4P46934 AL122020.1-201ENST00000472287 459 ntBASIC6.96□□□□□ -1.3
NEDD4P46934 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NEDD4P46934 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
NEDD4P46934 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.96□□□□□ -1.3
NEDD4P46934 TOMM22P4-201ENST00000511318 336 ntBASIC6.96□□□□□ -1.3
NEDD4P46934 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.96□□□□□ -1.3
NEDD4P46934 RN7SKP67-201ENST00000515905 235 ntBASIC6.96□□□□□ -1.3
NEDD4P46934 RNA5SP116-201ENST00000516132 98 ntBASIC6.96□□□□□ -1.3
NEDD4P46934 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.96□□□□□ -1.3
NEDD4P46934 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.96□□□□□ -1.3
NEDD4P46934 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NEDD4P46934 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.96□□□□□ -1.3
NEDD4P46934 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.96□□□□□ -1.3
NEDD4P46934 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
NEDD4P46934 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NEDD4P46934 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.96□□□□□ -1.3
NEDD4P46934 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.95□□□□□ -1.3
NEDD4P46934 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
NEDD4P46934 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.95□□□□□ -1.3
NEDD4P46934 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
NEDD4P46934 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.95□□□□□ -1.3
NEDD4P46934 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.95□□□□□ -1.3
NEDD4P46934 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.95□□□□□ -1.3
NEDD4P46934 RN7SKP29-201ENST00000410957 272 ntBASIC6.95□□□□□ -1.3
NEDD4P46934 IPPKP1-201ENST00000422501 768 ntBASIC6.95□□□□□ -1.3
NEDD4P46934 GAPDHP34-201ENST00000432112 823 ntBASIC6.95□□□□□ -1.3
NEDD4P46934 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.95□□□□□ -1.3
NEDD4P46934 AL512637.1-201ENST00000439523 1231 ntBASIC6.95□□□□□ -1.3
NEDD4P46934 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.95□□□□□ -1.3
NEDD4P46934 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.95□□□□□ -1.3
NEDD4P46934 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.95□□□□□ -1.3
NEDD4P46934 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.95□□□□□ -1.3
NEDD4P46934 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.95□□□□□ -1.3
NEDD4P46934 NDUFA5P11-201ENST00000567995 343 ntBASIC6.95□□□□□ -1.3
NEDD4P46934 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
NEDD4P46934 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.95□□□□□ -1.3
NEDD4P46934 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.95□□□□□ -1.3
NEDD4P46934 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.95□□□□□ -1.3
NEDD4P46934 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.95□□□□□ -1.3
NEDD4P46934 SNX18P12-201ENST00000624821 759 ntBASIC6.95□□□□□ -1.3
NEDD4P46934 AC099654.11-201ENST00000638857 294 ntBASIC6.95□□□□□ -1.3
NEDD4P46934 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
NEDD4P46934 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
NEDD4P46934 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.95□□□□□ -1.3
NEDD4P46934 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
NEDD4P46934 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
NEDD4P46934 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD4P46934 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD4P46934 FBXL21-201ENST00000297158 1305 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD4P46934 AC007159.1-201ENST00000566529 4706 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD4P46934 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD4P46934 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD4P46934 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD4P46934 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD4P46934 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD4P46934 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.94□□□□□ -1.3
NEDD4P46934 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.94□□□□□ -1.3
NEDD4P46934 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD4P46934 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD4P46934 RN7SKP15-201ENST00000364742 309 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.94□□□□□ -1.3
NEDD4P46934 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD4P46934 OR2W4P-201ENST00000406496 926 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 HMGN1P20-201ENST00000411849 300 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 MRPL53P1-201ENST00000414323 319 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 RPS3AP38-201ENST00000435889 763 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.94□□□□□ -1.3
NEDD4P46934 RN7SL57P-201ENST00000493687 290 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD4P46934 IGKV2-4-201ENST00000523070 340 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 OR4A42P-201ENST00000531397 938 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 AC090424.1-201ENST00000535243 736 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD4P46934 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
NEDD4P46934 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD4P46934 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD4P46934 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD4P46934 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD4P46934 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.94□□□□□ -1.3
NEDD4P46934 AC100767.2-201ENST00000604840 693 ntBASIC6.94□□□□□ -1.3
NEDD4P46934 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms