Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
COL15A1P39059 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
COL15A1P39059 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.6□□□□□ -1.19
COL15A1P39059 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL15A1P39059 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.6□□□□□ -1.19
COL15A1P39059 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.59□□□□□ -1.19
COL15A1P39059 RN7SKP162-201ENST00000363605 345 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.59□□□□□ -1.19
COL15A1P39059 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.59□□□□□ -1.19
COL15A1P39059 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 AL391422.1-201ENST00000402155 436 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 OR2AT2P-201ENST00000413438 905 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AL596448.1-201ENST00000415024 392 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AC015977.1-201ENST00000418887 292 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AC007568.1-201ENST00000422912 471 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AL163193.1-201ENST00000444895 788 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 EEF1B2P6-201ENST00000445713 673 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.59□□□□□ -1.19
COL15A1P39059 AL022319.1-201ENST00000458183 1167 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AC104164.1-201ENST00000460282 590 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AC008410.1-201ENST00000483777 339 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AC083795.1-201ENST00000491760 320 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.59□□□□□ -1.19
COL15A1P39059 AC084033.1-201ENST00000550830 633 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.59□□□□□ -1.19
COL15A1P39059 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.59□□□□□ -1.19
COL15A1P39059 MIR4505-201ENST00000582238 73 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.59□□□□□ -1.19
COL15A1P39059 AC087565.3-203ENST00000641018 837 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 AC009948.3-201ENST00000603415 1798 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
COL15A1P39059 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.59□□□□□ -1.19
COL15A1P39059 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
COL15A1P39059 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
COL15A1P39059 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.59□□□□□ -1.19
COL15A1P39059 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
COL15A1P39059 PARP4P2-201ENST00000446672 3326 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
COL15A1P39059 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 MARK2P4-201ENST00000503381 2380 ntBASIC7.59□□□□□ -1.19
COL15A1P39059 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL15A1P39059 AC016583.1-201ENST00000624221 2431 ntBASIC7.59□□□□□ -1.2
COL15A1P39059 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.59□□□□□ -1.2
COL15A1P39059 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
COL15A1P39059 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.59□□□□□ -1.2
COL15A1P39059 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.59□□□□□ -1.2
COL15A1P39059 NPM1P4-201ENST00000414095 812 ntBASIC7.59□□□□□ -1.2
COL15A1P39059 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.59□□□□□ -1.2
COL15A1P39059 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.59□□□□□ -1.2
COL15A1P39059 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.59□□□□□ -1.2
COL15A1P39059 DEFA9P-201ENST00000433042 285 ntBASIC7.59□□□□□ -1.2
COL15A1P39059 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC7.59□□□□□ -1.2
COL15A1P39059 RPS7P3-201ENST00000443360 580 ntBASIC7.59□□□□□ -1.2
COL15A1P39059 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.59□□□□□ -1.2
COL15A1P39059 COPS8P2-201ENST00000473228 627 ntBASIC7.59□□□□□ -1.2
COL15A1P39059 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
COL15A1P39059 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.2
COL15A1P39059 RNA5SP34-201ENST00000516887 130 ntBASIC7.59□□□□□ -1.2
COL15A1P39059 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC7.59□□□□□ -1.2
COL15A1P39059 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.59□□□□□ -1.2
COL15A1P39059 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.59□□□□□ -1.2
COL15A1P39059 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.59□□□□□ -1.2
COL15A1P39059 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.59□□□□□ -1.2
COL15A1P39059 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.59□□□□□ -1.2
COL15A1P39059 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.58□□□□□ -1.2
COL15A1P39059 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.58□□□□□ -1.2
COL15A1P39059 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.58□□□□□ -1.2
COL15A1P39059 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.58□□□□□ -1.2
COL15A1P39059 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 AC078880.4-201ENST00000617627 1749 ntBASIC7.58□□□□□ -1.2
COL15A1P39059 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
COL15A1P39059 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.58□□□□□ -1.2
COL15A1P39059 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
COL15A1P39059 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
COL15A1P39059 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
COL15A1P39059 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
COL15A1P39059 RN7SKP166-201ENST00000410812 305 ntBASIC7.58□□□□□ -1.2
COL15A1P39059 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.58□□□□□ -1.2
COL15A1P39059 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.58□□□□□ -1.2
COL15A1P39059 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.58□□□□□ -1.2
COL15A1P39059 AC079922.1-201ENST00000443291 359 ntBASIC7.58□□□□□ -1.2
COL15A1P39059 AL035690.1-201ENST00000490892 383 ntBASIC7.58□□□□□ -1.2
COL15A1P39059 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms