Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.87□□□□□ -1.31
LTBRP36941 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LTBRP36941 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LTBRP36941 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LTBRP36941 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LTBRP36941 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
LTBRP36941 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LTBRP36941 Z97989.1-201ENST00000531702 2421 ntBASIC6.87□□□□□ -1.31
LTBRP36941 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LTBRP36941 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LTBRP36941 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LTBRP36941 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.87□□□□□ -1.31
LTBRP36941 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.87□□□□□ -1.31
LTBRP36941 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.87□□□□□ -1.31
LTBRP36941 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.87□□□□□ -1.31
LTBRP36941 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.86□□□□□ -1.31
LTBRP36941 AC130360.2-201ENST00000533477 1556 ntBASIC6.86□□□□□ -1.31
LTBRP36941 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.86□□□□□ -1.31
LTBRP36941 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.86□□□□□ -1.31
LTBRP36941 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
LTBRP36941 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 AC122713.2-201ENST00000624942 3335 ntBASIC6.86□□□□□ -1.31
LTBRP36941 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 SNORD56.4-201ENST00000363883 71 ntBASIC6.86□□□□□ -1.31
LTBRP36941 SUGT1P2-201ENST00000379452 992 ntBASIC6.86□□□□□ -1.31
LTBRP36941 MIR130B-202ENST00000385018 82 ntBASIC6.86□□□□□ -1.31
LTBRP36941 RNU6-1242P-201ENST00000391052 103 ntBASIC6.86□□□□□ -1.31
LTBRP36941 HMGB1P10-201ENST00000395823 563 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AL021331.1-201ENST00000402817 582 ntBASIC6.86□□□□□ -1.31
LTBRP36941 RPL5P20-201ENST00000403848 896 ntBASIC6.86□□□□□ -1.31
LTBRP36941 RNU2-17P-201ENST00000410290 190 ntBASIC6.86□□□□□ -1.31
LTBRP36941 RN7SKP182-201ENST00000410772 298 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 RPP40P1-201ENST00000426762 456 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.86□□□□□ -1.31
LTBRP36941 AC084290.1-201ENST00000434995 374 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 AC000041.1-201ENST00000439655 175 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AC073052.1-201ENST00000440417 714 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AL645936.1-201ENST00000441979 518 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AL590004.3-202ENST00000445883 451 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.86□□□□□ -1.31
LTBRP36941 RPS4XP6-201ENST00000477670 797 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AC135999.1-201ENST00000478962 479 ntBASIC6.86□□□□□ -1.31
LTBRP36941 SNORA3.4-201ENST00000515969 96 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 AC008429.2-201ENST00000523057 864 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 AC023050.2-201ENST00000544968 387 ntBASIC6.86□□□□□ -1.31
LTBRP36941 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 AC092332.1-201ENST00000563684 829 ntBASIC6.86□□□□□ -1.31
LTBRP36941 RN7SL475P-201ENST00000583379 298 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 AC013244.1-201ENST00000604279 193 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AL592494.3-201ENST00000609485 464 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AC092106.3-201ENST00000611308 722 ntBASIC6.86□□□□□ -1.31
LTBRP36941 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.86□□□□□ -1.31
LTBRP36941 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 OR8G3P-202ENST00000641572 1255 ntBASIC6.86□□□□□ -1.31
LTBRP36941 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 AC027575.3-201ENST00000583058 2747 ntBASIC6.86□□□□□ -1.31
LTBRP36941 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.86□□□□□ -1.31
LTBRP36941 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 AC096992.2-201ENST00000609553 1684 ntBASIC6.86□□□□□ -1.31
LTBRP36941 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
LTBRP36941 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.86□□□□□ -1.31
LTBRP36941 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
LTBRP36941 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.86□□□□□ -1.31
LTBRP36941 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LTBRP36941 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms