Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A5P29400 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A5P29400 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.9□□□□□ -1.31
COL4A5P29400 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A5P29400 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.9□□□□□ -1.31
COL4A5P29400 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A5P29400 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.9□□□□□ -1.31
COL4A5P29400 RN7SL591P-201ENST00000496150 292 ntBASIC6.9□□□□□ -1.31
COL4A5P29400 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.9□□□□□ -1.31
COL4A5P29400 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.9□□□□□ -1.31
COL4A5P29400 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.9□□□□□ -1.31
COL4A5P29400 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.9□□□□□ -1.31
COL4A5P29400 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A5P29400 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.9□□□□□ -1.31
COL4A5P29400 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.9□□□□□ -1.31
COL4A5P29400 LINC01739-205ENST00000641890 573 ntBASIC6.9□□□□□ -1.31
COL4A5P29400 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A5P29400 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A5P29400 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A5P29400 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL4A5P29400 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A5P29400 AC130304.1-201ENST00000622942 2385 ntBASIC6.89□□□□□ -1.31
COL4A5P29400 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL4A5P29400 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL4A5P29400 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL4A5P29400 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A5P29400 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
COL4A5P29400 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COL4A5P29400 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
COL4A5P29400 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A5P29400 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A5P29400 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A5P29400 HIGD1AP8-201ENST00000453927 274 ntBASIC6.89□□□□□ -1.31
COL4A5P29400 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A5P29400 ST13P12-201ENST00000508958 1094 ntBASIC6.89□□□□□ -1.31
COL4A5P29400 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
COL4A5P29400 RN7SKP66-201ENST00000516681 231 ntBASIC6.89□□□□□ -1.31
COL4A5P29400 MIR132-201ENST00000591554 101 ntBASIC6.89□□□□□ -1.31
COL4A5P29400 uc_338.18-201ENST00000615451 175 ntBASIC6.89□□□□□ -1.31
COL4A5P29400 AC025574.2-201ENST00000615621 514 ntBASIC6.89□□□□□ -1.31
COL4A5P29400 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A5P29400 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A5P29400 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A5P29400 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A5P29400 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A5P29400 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A5P29400 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A5P29400 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A5P29400 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A5P29400 CASC19-205ENST00000641013 1411 ntBASIC6.89□□□□□ -1.31
COL4A5P29400 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 SNORA16A-201ENST00000384342 137 ntBASIC6.88□□□□□ -1.31
COL4A5P29400 AC019205.1-201ENST00000421830 730 ntBASIC6.88□□□□□ -1.31
COL4A5P29400 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.88□□□□□ -1.31
COL4A5P29400 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.88□□□□□ -1.31
COL4A5P29400 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 RPL7P39-201ENST00000481157 744 ntBASIC6.88□□□□□ -1.31
COL4A5P29400 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.88□□□□□ -1.31
COL4A5P29400 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.88□□□□□ -1.31
COL4A5P29400 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.88□□□□□ -1.31
COL4A5P29400 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.88□□□□□ -1.31
COL4A5P29400 AC087783.2-201ENST00000605070 562 ntBASIC6.88□□□□□ -1.31
COL4A5P29400 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.88□□□□□ -1.31
COL4A5P29400 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC6.88□□□□□ -1.31
COL4A5P29400 MITF-203ENST00000328528 4680 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A5P29400 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A5P29400 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL4A5P29400 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.87□□□□□ -1.31
COL4A5P29400 RN7SL51P-201ENST00000468230 285 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.87□□□□□ -1.31
COL4A5P29400 AC022832.1-201ENST00000530718 645 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 BLZF2P-201ENST00000553776 1130 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.87□□□□□ -1.31
COL4A5P29400 AC004890.3-201ENST00000605566 1095 ntBASIC6.87□□□□□ -1.31
COL4A5P29400 AC091953.3-201ENST00000623220 236 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms