Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TRIM43CP-201ENST00000422468 1028 ntBASIC7.98□□□□□ -1.13
VARSP26640 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 AL009174.1-201ENST00000426577 416 ntBASIC7.98□□□□□ -1.13
VARSP26640 AL121776.1-201ENST00000429337 372 ntBASIC7.98□□□□□ -1.13
VARSP26640 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.98□□□□□ -1.13
VARSP26640 AC007683.1-201ENST00000432746 591 ntBASIC7.98□□□□□ -1.13
VARSP26640 AL451074.3-201ENST00000437709 472 ntBASIC7.98□□□□□ -1.13
VARSP26640 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC7.98□□□□□ -1.13
VARSP26640 HMGB3P9-201ENST00000441799 583 ntBASIC7.98□□□□□ -1.13
VARSP26640 FTH1P27-201ENST00000449509 551 ntBASIC7.98□□□□□ -1.13
VARSP26640 AL109809.3-201ENST00000456875 246 ntBASIC7.98□□□□□ -1.13
VARSP26640 ARPC3P2-201ENST00000457786 533 ntBASIC7.98□□□□□ -1.13
VARSP26640 RPL5P17-201ENST00000469685 877 ntBASIC7.98□□□□□ -1.13
VARSP26640 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.98□□□□□ -1.13
VARSP26640 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.98□□□□□ -1.13
VARSP26640 RN7SL505P-201ENST00000482644 293 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC114964.1-201ENST00000502306 1111 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC022447.3-201ENST00000506865 495 ntBASIC7.98□□□□□ -1.13
VARSP26640 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.98□□□□□ -1.13
VARSP26640 AC226119.2-201ENST00000513501 530 ntBASIC7.98□□□□□ -1.13
VARSP26640 SNRPCP8-201ENST00000514820 211 ntBASIC7.98□□□□□ -1.13
VARSP26640 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VARSP26640 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC007751.2-201ENST00000534173 291 ntBASIC7.98□□□□□ -1.13
VARSP26640 OR5AN2P-201ENST00000534535 896 ntBASIC7.98□□□□□ -1.13
VARSP26640 YWHABP2-201ENST00000540201 713 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.98□□□□□ -1.13
VARSP26640 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.98□□□□□ -1.13
VARSP26640 ATP5F1P7-201ENST00000567330 760 ntBASIC7.98□□□□□ -1.13
VARSP26640 CYP4A44P-201ENST00000569984 154 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC007151.1-201ENST00000572774 483 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC015818.5-201ENST00000578659 356 ntBASIC7.98□□□□□ -1.13
VARSP26640 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.98□□□□□ -1.13
VARSP26640 AP005137.2-201ENST00000609238 400 ntBASIC7.98□□□□□ -1.13
VARSP26640 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC007792.1-201ENST00000623023 402 ntBASIC7.98□□□□□ -1.13
VARSP26640 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC7.98□□□□□ -1.13
VARSP26640 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 AC241377.2-202ENST00000636462 997 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC241585.4-201ENST00000640951 686 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC016251.1-201ENST00000624299 4198 ntBASIC7.98□□□□□ -1.13
VARSP26640 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 AL359694.2-201ENST00000567753 1615 ntBASIC7.98□□□□□ -1.13
VARSP26640 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VARSP26640 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
VARSP26640 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
VARSP26640 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
VARSP26640 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.98□□□□□ -1.13
VARSP26640 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC7.98□□□□□ -1.13
VARSP26640 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.97□□□□□ -1.13
VARSP26640 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 AC011592.1-201ENST00000624647 3634 ntBASIC7.97□□□□□ -1.13
VARSP26640 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.97□□□□□ -1.13
VARSP26640 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 AF228730.7-203ENST00000641436 1804 ntBASIC7.97□□□□□ -1.13
VARSP26640 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC7.97□□□□□ -1.13
VARSP26640 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
VARSP26640 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
VARSP26640 Y_RNA.58-201ENST00000362807 102 ntBASIC7.97□□□□□ -1.13
VARSP26640 SNORD56.2-201ENST00000363242 71 ntBASIC7.97□□□□□ -1.13
VARSP26640 Y_RNA.154-201ENST00000363624 102 ntBASIC7.97□□□□□ -1.13
VARSP26640 RN7SKP48-201ENST00000365031 328 ntBASIC7.97□□□□□ -1.13
VARSP26640 RNY3P1-201ENST00000365085 102 ntBASIC7.97□□□□□ -1.13
VARSP26640 RNY3-201ENST00000365484 102 ntBASIC7.97□□□□□ -1.13
VARSP26640 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 Y_RNA.490-201ENST00000384413 102 ntBASIC7.97□□□□□ -1.13
VARSP26640 OR7E101P-201ENST00000400428 513 ntBASIC7.97□□□□□ -1.13
VARSP26640 GSTA9P-201ENST00000406231 611 ntBASIC7.97□□□□□ -1.13
VARSP26640 VN1R33P-201ENST00000411800 887 ntBASIC7.97□□□□□ -1.13
VARSP26640 GNAI2P2-201ENST00000417003 916 ntBASIC7.97□□□□□ -1.13
VARSP26640 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.97□□□□□ -1.13
VARSP26640 PUDPP1-201ENST00000421058 495 ntBASIC7.97□□□□□ -1.13
VARSP26640 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.97□□□□□ -1.13
VARSP26640 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
VARSP26640 ASS1P5-201ENST00000435496 1239 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms