Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 STAG3L4-201ENST00000352103 530 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 Y_RNA.318-201ENST00000365131 97 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 HMGB1P10-201ENST00000395823 563 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 NHP2P2-201ENST00000396362 460 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.7□□□□□ -1.34
COL6A2P12110 AL021331.1-201ENST00000402817 582 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 CYCSP17-201ENST00000407870 315 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 MFSD13B-201ENST00000420133 1290 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 AL513175.2-201ENST00000422071 443 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 OR5M12P-201ENST00000423388 929 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
COL6A2P12110 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 AC114402.2-201ENST00000432760 643 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.7□□□□□ -1.34
COL6A2P12110 BX005266.3-201ENST00000443013 1075 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
COL6A2P12110 AC104849.1-201ENST00000462623 405 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.7□□□□□ -1.34
COL6A2P12110 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 BET1P1-201ENST00000482276 359 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.7□□□□□ -1.34
COL6A2P12110 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.7□□□□□ -1.34
COL6A2P12110 AC083906.1-201ENST00000509298 406 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.7□□□□□ -1.34
COL6A2P12110 RNU6-1334P-201ENST00000516032 105 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.7□□□□□ -1.34
COL6A2P12110 KCTD9P4-201ENST00000526766 1166 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 DUXAP6-201ENST00000553858 601 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.7□□□□□ -1.34
COL6A2P12110 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.7□□□□□ -1.34
COL6A2P12110 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 RN7SL270P-201ENST00000579643 281 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 Z99497.2-201ENST00000603634 310 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AL035411.2-201ENST00000604022 421 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 pRNA.9-201ENST00000618609 89 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AC098679.4-201ENST00000624241 654 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.7□□□□□ -1.34
COL6A2P12110 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.7□□□□□ -1.34
COL6A2P12110 OR7A1P-202ENST00000641542 1158 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
COL6A2P12110 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.7□□□□□ -1.34
COL6A2P12110 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.7□□□□□ -1.34
COL6A2P12110 AL137058.3-201ENST00000624531 3099 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.7□□□□□ -1.34
COL6A2P12110 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 DOCK11P1-201ENST00000553480 5932 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.69□□□□□ -1.34
COL6A2P12110 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.69□□□□□ -1.34
COL6A2P12110 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.69□□□□□ -1.34
COL6A2P12110 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
COL6A2P12110 RNU5B-1-201ENST00000363286 116 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 RN7SKP1-201ENST00000365525 307 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
COL6A2P12110 NPM1P37-201ENST00000403105 874 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 RNU2-17P-201ENST00000410290 190 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 SNX18P13-201ENST00000412442 529 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 BTF3P9-201ENST00000418784 283 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.69□□□□□ -1.34
COL6A2P12110 SNRPEP5-201ENST00000425442 278 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 GTF2IP3-201ENST00000433887 494 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 ATP5LP4-201ENST00000434169 307 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 AC019185.3-201ENST00000438805 323 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.69□□□□□ -1.34
COL6A2P12110 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.69□□□□□ -1.34
COL6A2P12110 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL6A2P12110 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.69□□□□□ -1.34
COL6A2P12110 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 AP003033.1-201ENST00000527244 415 ntBASIC6.69□□□□□ -1.34
COL6A2P12110 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.69□□□□□ -1.34
COL6A2P12110 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms