Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL357752.1-201ENST00000412817 349 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.61□□□□□ -1.35
COL11A1P12107 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.61□□□□□ -1.35
COL11A1P12107 AURKAPS1-201ENST00000451805 1212 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.61□□□□□ -1.35
COL11A1P12107 AC024558.1-201ENST00000505008 528 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.61□□□□□ -1.35
COL11A1P12107 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.61□□□□□ -1.35
COL11A1P12107 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL11A1P12107 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.61□□□□□ -1.35
COL11A1P12107 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.61□□□□□ -1.35
COL11A1P12107 AC239803.2-201ENST00000610161 430 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 MIR6798-201ENST00000612887 67 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 AL359513.1-201ENST00000614364 557 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 AC021766.1-201ENST00000624404 741 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 AC079776.5-201ENST00000641920 211 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
COL11A1P12107 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.61□□□□□ -1.35
COL11A1P12107 AC104162.1-201ENST00000430831 2382 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.61□□□□□ -1.35
COL11A1P12107 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.61□□□□□ -1.35
COL11A1P12107 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL11A1P12107 AC005224.3-201ENST00000584683 2140 ntBASIC6.61□□□□□ -1.35
COL11A1P12107 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
COL11A1P12107 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL11A1P12107 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
COL11A1P12107 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.6□□□□□ -1.35
COL11A1P12107 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL11A1P12107 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 HMGA1P8-201ENST00000414130 321 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.6□□□□□ -1.35
COL11A1P12107 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.6□□□□□ -1.35
COL11A1P12107 RNU1-88P-201ENST00000459274 128 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.6□□□□□ -1.35
COL11A1P12107 AC021146.10-201ENST00000515628 706 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 BX510359.5-201ENST00000515651 304 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.6□□□□□ -1.35
COL11A1P12107 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.6□□□□□ -1.35
COL11A1P12107 AC024589.2-201ENST00000605642 1294 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 AL118522.2-201ENST00000616045 615 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL11A1P12107 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.6□□□□□ -1.35
COL11A1P12107 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL11A1P12107 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL11A1P12107 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
COL11A1P12107 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.6□□□□□ -1.35
COL11A1P12107 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.6□□□□□ -1.35
COL11A1P12107 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.6□□□□□ -1.35
COL11A1P12107 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
COL11A1P12107 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 AL161756.3-201ENST00000641216 2071 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
COL11A1P12107 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.6□□□□□ -1.35
COL11A1P12107 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 AC089998.1-201ENST00000548575 3141 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL11A1P12107 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL11A1P12107 RN7SKP160-201ENST00000363804 340 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.6□□□□□ -1.35
COL11A1P12107 CFL1P1-202ENST00000432948 411 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 AC092106.1-201ENST00000444291 373 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 SBDSP1-204ENST00000453858 737 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.6□□□□□ -1.35
COL11A1P12107 RPEP1-201ENST00000504507 658 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.6□□□□□ -1.35
COL11A1P12107 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.6□□□□□ -1.35
COL11A1P12107 MIR4301-201ENST00000577203 66 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 AC211433.2-201ENST00000608433 387 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 AC016769.4-201ENST00000616893 535 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 AC068870.2-201ENST00000620635 389 ntBASIC6.6□□□□□ -1.35
COL11A1P12107 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.6□□□□□ -1.35
COL11A1P12107 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.59□□□□□ -1.35
COL11A1P12107 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
COL11A1P12107 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL11A1P12107 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL11A1P12107 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
COL11A1P12107 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
COL11A1P12107 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL11A1P12107 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.59□□□□□ -1.35
COL11A1P12107 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.59□□□□□ -1.35
COL11A1P12107 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
COL11A1P12107 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL11A1P12107 AC087516.1-201ENST00000561236 2428 ntBASIC6.59□□□□□ -1.35
COL11A1P12107 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL11A1P12107 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.59□□□□□ -1.35
COL11A1P12107 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL11A1P12107 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms