Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNORA31.13-201ENST00000516624 135 ntBASIC8.7□□□□□ -1.02
RNF40O75150 PAICSP4-201ENST00000517543 1253 ntBASIC8.7□□□□□ -1.02
RNF40O75150 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 AP002748.2-201ENST00000528671 348 ntBASIC8.7□□□□□ -1.02
RNF40O75150 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 AC107954.1-201ENST00000565906 727 ntBASIC8.7□□□□□ -1.02
RNF40O75150 AC006120.1-201ENST00000579375 546 ntBASIC8.7□□□□□ -1.02
RNF40O75150 MIR5008-201ENST00000584300 94 ntBASIC8.7□□□□□ -1.02
RNF40O75150 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.7□□□□□ -1.02
RNF40O75150 AC090425.1-201ENST00000610007 140 ntBASIC8.7□□□□□ -1.02
RNF40O75150 AC138904.2-201ENST00000614412 107 ntBASIC8.7□□□□□ -1.02
RNF40O75150 MIR6505-201ENST00000617206 71 ntBASIC8.7□□□□□ -1.02
RNF40O75150 AC069209.1-201ENST00000619282 651 ntBASIC8.7□□□□□ -1.02
RNF40O75150 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.7□□□□□ -1.02
RNF40O75150 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 MTND5P16-201ENST00000460269 1703 ntBASIC8.7□□□□□ -1.02
RNF40O75150 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.7□□□□□ -1.02
RNF40O75150 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC8.7□□□□□ -1.02
RNF40O75150 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 AC051619.3-201ENST00000560646 2426 ntBASIC8.7□□□□□ -1.02
RNF40O75150 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC8.7□□□□□ -1.02
RNF40O75150 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.7□□□□□ -1.02
RNF40O75150 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RNF40O75150 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 FLJ42393-201ENST00000623801 2270 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 AL096816.1-201ENST00000623300 2920 ntBASIC8.69□□□□□ -1.02
RNF40O75150 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 AC036108.4-201ENST00000611654 2516 ntBASIC8.69□□□□□ -1.02
RNF40O75150 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 RNU6-845P-201ENST00000362578 103 ntBASIC8.69□□□□□ -1.02
RNF40O75150 SNORA73A-201ENST00000364938 206 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AC104297.1-201ENST00000393779 870 ntBASIC8.69□□□□□ -1.02
RNF40O75150 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 AMD1P2-201ENST00000412936 992 ntBASIC8.69□□□□□ -1.02
RNF40O75150 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 AL513302.1-201ENST00000415679 428 ntBASIC8.69□□□□□ -1.02
RNF40O75150 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 AC018630.2-202ENST00000422992 927 ntBASIC8.69□□□□□ -1.02
RNF40O75150 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 RANP5-201ENST00000427731 655 ntBASIC8.69□□□□□ -1.02
RNF40O75150 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 AL451074.3-201ENST00000437709 472 ntBASIC8.69□□□□□ -1.02
RNF40O75150 SDCBPP1-201ENST00000440192 890 ntBASIC8.69□□□□□ -1.02
RNF40O75150 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 AC092634.4-203ENST00000451395 448 ntBASIC8.69□□□□□ -1.02
RNF40O75150 SUMO2P10-201ENST00000452006 288 ntBASIC8.69□□□□□ -1.02
RNF40O75150 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 RPS20P4-201ENST00000461659 355 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC8.69□□□□□ -1.02
RNF40O75150 RNA5SP159-201ENST00000517161 103 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC8.69□□□□□ -1.02
RNF40O75150 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 IGKV3D-31-201ENST00000519131 281 ntBASIC8.69□□□□□ -1.02
RNF40O75150 IGHVII-30-1-201ENST00000522218 301 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AP005597.4-201ENST00000526762 229 ntBASIC8.69□□□□□ -1.02
RNF40O75150 OR5AP1P-201ENST00000529730 940 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 AC013452.1-201ENST00000560630 598 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms