Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC005722.2-201ENST00000577087 3370 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 C5orf22-201ENST00000325366 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 ZNF30-206ENST00000601957 2583 ntTSL 2 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 Y_RNA.364-201ENST00000365532 101 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RNU4-31P-201ENST00000384211 141 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 Y_RNA.555-201ENST00000384673 110 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RPL31P52-201ENST00000407532 367 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC003080.1-201ENST00000413552 767 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC127526.1-201ENST00000417526 366 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RPL31P12-201ENST00000422587 358 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 CTBP2P1-201ENST00000431853 245 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RPSAP53-201ENST00000433498 862 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AP000532.1-201ENST00000440999 177 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AL359672.1-201ENST00000442302 409 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 EFCAB14P1-201ENST00000442409 463 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AL135929.1-201ENST00000449287 552 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AL606490.1-201ENST00000452266 765 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC233702.1-201ENST00000482905 502 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RN7SL241P-201ENST00000482973 236 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RPL22P13-201ENST00000493291 347 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC097460.2-201ENST00000511857 741 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RNU6-408P-201ENST00000515910 100 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 NPIPA3-202ENST00000531598 1155 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AL359792.1-201ENST00000554046 385 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 UBE2CP4-201ENST00000561405 535 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC068020.1-201ENST00000594215 661 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC130352.1-201ENST00000602979 661 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC011626.1-201ENST00000604710 562 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC008875.1-201ENST00000607715 811 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 MIR6774-201ENST00000614651 70 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AL354950.2-201ENST00000617939 290 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AP003068.4-201ENST00000623192 802 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC005796.1-201ENST00000623214 433 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 ANK2-216ENST00000510275 1770 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 NLRP3P1-201ENST00000622303 1785 ntBASIC8.42□□□□□ -1.06
LHX6Q9UPM6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 DMD-206ENST00000361471 2224 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 DMP1-202ENST00000339673 2682 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 L3MBTL3-202ENST00000368136 4235 ntAPPRIS P4 TSL 5 BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
LHX6Q9UPM6 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
LHX6Q9UPM6 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
LHX6Q9UPM6 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC8.41□□□□□ -1.06
LHX6Q9UPM6 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
LHX6Q9UPM6 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.41□□□□□ -1.06
LHX6Q9UPM6 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
LHX6Q9UPM6 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms