Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 VN1R110P-201ENST00000438988 971 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 RPL23AP60-201ENST00000450011 454 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 GEMIN2P1-201ENST00000454246 752 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 ACA64.1-201ENST00000459171 127 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 KATNBL1P4-201ENST00000503545 918 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 SETP21-201ENST00000514799 892 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AL136131.3-201ENST00000607600 188 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC244517.3-201ENST00000616254 1235 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 AC116667.2-201ENST00000641075 823 ntBASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLCF1Q9UBD9 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 TMSB4XP2-201ENST00000335179 210 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 RNU1-150P-201ENST00000362491 162 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 SNORD8-201ENST00000363915 110 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AL096800.1-201ENST00000405326 893 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AL354890.1-201ENST00000413730 346 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 CT45A11P-201ENST00000448043 1134 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AC112187.1-201ENST00000455837 479 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 RN7SL269P-201ENST00000467795 305 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AC023245.1-201ENST00000468501 517 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AC114781.3-201ENST00000512083 142 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 OR4A40P-201ENST00000533878 948 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AL117378.2-201ENST00000622916 1337 ntBASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLCF1Q9UBD9 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 RN7SKP269-201ENST00000365545 319 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 MIR1203-201ENST00000408812 85 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 RNU4-64P-201ENST00000410795 131 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 RNU6-233P-201ENST00000410845 141 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 NMD3P2-201ENST00000421815 761 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 NAP1L4P2-201ENST00000425958 899 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC073109.1-201ENST00000445066 978 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC011476.1-201ENST00000466725 307 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AL122020.1-201ENST00000472287 459 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 AC083795.1-201ENST00000491760 320 ntBASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.37□□□□□ -1.55
CLCF1Q9UBD9 WBP1LP3-201ENST00000523033 208 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms