Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 AL606490.7-201ENST00000433136 191 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 Z99127.2-201ENST00000441426 334 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC023194.2-201ENST00000465398 406 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC108729.1-201ENST00000487812 947 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 MTND6P8-201ENST00000503471 522 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 AP001496.3-201ENST00000580230 913 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 RN7SL753P-201ENST00000581238 290 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC015849.2-201ENST00000605738 409 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC092681.3-201ENST00000609463 678 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC245389.2-201ENST00000616023 576 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC242843.1-201ENST00000618702 573 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC079298.2-201ENST00000623885 459 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 AC008691.1-209ENST00000642094 814 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 AL354854.1-201ENST00000455940 1363 ntBASIC7.17□□□□□ -1.26
VTA1Q9NP79 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VTA1Q9NP79 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
VTA1Q9NP79 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 ZNF101P1-201ENST00000435701 1720 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 RNU6-650P-201ENST00000365658 111 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 RPL34P27-201ENST00000428810 349 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 XKRY2-201ENST00000442362 1093 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 MOB1AP2-201ENST00000446060 614 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC025458.1-201ENST00000506046 166 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC091965.3-201ENST00000506236 208 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC106800.3-201ENST00000511389 308 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 RN7SKP98-201ENST00000517070 156 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 IGKV1D-22-201ENST00000518953 324 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC079905.1-201ENST00000549280 475 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 LINC00556-201ENST00000569603 412 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AL953862.2-201ENST00000603089 820 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AP001823.1-201ENST00000604056 1003 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AL359704.2-201ENST00000604335 521 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 OR51C1P-201ENST00000608504 942 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC004801.6-201ENST00000616571 978 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AL645927.2-201ENST00000618350 349 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 TSHZ2-205ENST00000626626 670 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AL596275.2-208ENST00000641192 594 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 NEK2P2-201ENST00000438441 1338 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC010624.4-201ENST00000597606 1351 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC092821.3-202ENST00000641304 2767 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AL596244.1-201ENST00000567068 3779 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC017002.4-201ENST00000604721 1525 ntBASIC7.16□□□□□ -1.26
VTA1Q9NP79 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
VTA1Q9NP79 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC009135.2-201ENST00000624136 1768 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
VTA1Q9NP79 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VTA1Q9NP79 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VTA1Q9NP79 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms