Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
SUDS3Q9H7L9 CASC19-260ENST00000641828 2001 ntBASIC6.4□□□□□ -1.39
SUDS3Q9H7L9 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
SUDS3Q9H7L9 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SUDS3Q9H7L9 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 CDY11P-201ENST00000447168 1651 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC011815.2-201ENST00000618230 2021 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 RN7SKP187-201ENST00000365536 330 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 VN1R12P-201ENST00000403778 876 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 RN7SKP86-201ENST00000410454 332 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 RNA5SP296-201ENST00000410523 111 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 RPS17P17-201ENST00000419392 409 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AL157884.1-201ENST00000424561 454 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC002069.1-201ENST00000429649 1159 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 CXCR2P1-202ENST00000443392 1074 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 OR52E7P-201ENST00000452394 933 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC114728.1-201ENST00000488289 483 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC021006.1-201ENST00000489849 553 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC011853.1-201ENST00000518911 454 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 IGKV1D-22-201ENST00000518953 324 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 NPIPB14P-203ENST00000532298 987 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC024405.1-201ENST00000532521 1042 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 RPSAP75-201ENST00000605848 301 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC093388.1-201ENST00000609166 430 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC073592.6-201ENST00000624271 415 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC092451.3-201ENST00000625067 1343 ntBASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SUDS3Q9H7L9 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 MIR621-201ENST00000384919 96 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AC092967.1-201ENST00000449016 481 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 VN1R38P-201ENST00000450265 887 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AP000859.1-201ENST00000525536 307 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AL359091.2-201ENST00000609303 556 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 MIR7109-201ENST00000613748 65 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AL445649.1-201ENST00000615941 691 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 RNA5SP439-201ENST00000617595 124 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 LYARP1-201ENST00000436977 1501 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 AC110373.1-201ENST00000505994 3505 ntBASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.38□□□□□ -1.39
SUDS3Q9H7L9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms