Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 PAXIP1-201ENST00000397192 3711 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SUPT5H-213ENST00000598725 3742 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 NR2C2-203ENST00000406272 1791 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL512844.1-201ENST00000415279 1779 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC079465.1-201ENST00000416046 3361 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC079594.2-201ENST00000483754 3360 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 TTPAL-201ENST00000262605 6212 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 POLR3B-201ENST00000228347 4273 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 DHDDS-201ENST00000236342 1403 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CYP11B1-201ENST00000292427 2664 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SCN1B-208ENST00000640135 4846 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 GRIA1-201ENST00000285900 5708 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ANO10-201ENST00000292246 3212 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ZP1-201ENST00000278853 1954 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 STK33-202ENST00000358872 1991 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL023802.1-201ENST00000447372 3775 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 ECE2-204ENST00000402825 3445 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 OTUD6B-205ENST00000615618 3434 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 MS4A14-209ENST00000531787 2537 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SLC22A8-202ENST00000336232 2178 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 TIGD7-201ENST00000396862 3612 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SYT17-202ENST00000562034 5092 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RBP5-201ENST00000266560 1012 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 FUNDC2P1-201ENST00000327891 570 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 FP885919.1-201ENST00000331259 1038 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 MYL9-202ENST00000346786 1024 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.22-201ENST00000362492 102 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SNORA63.5-201ENST00000363548 123 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.151-201ENST00000363566 112 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SNORA65-201ENST00000364432 130 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PPP1R32-202ENST00000366212 488 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL354979.1-201ENST00000369027 266 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CLPSL1-201ENST00000373861 602 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SNRPC-203ENST00000374018 600 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CSNK2B-204ENST00000375885 1061 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 MIR497-201ENST00000385056 112 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RNU6-205P-201ENST00000390858 107 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 U3.17-201ENST00000390863 203 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL592291.1-201ENST00000403830 352 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RPL23AP47-201ENST00000408017 460 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SNORA79-201ENST00000408376 140 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 C2orf70-202ENST00000409392 764 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL357752.1-201ENST00000412817 349 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SLC6A1-AS1-201ENST00000414969 584 ntTSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL080273.1-201ENST00000414989 535 ntTSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 HSPD1P6-202ENST00000424886 571 ntTSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 KCNK16-203ENST00000425054 1272 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PMP22-204ENST00000426385 571 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PRAMEF32P-201ENST00000431596 1068 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL441963.1-201ENST00000435137 792 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL590440.1-201ENST00000436960 428 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RSU1P2-202ENST00000437884 485 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SNRPEP7-201ENST00000438350 220 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL138899.2-201ENST00000439139 499 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RPL15P1-201ENST00000439981 600 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL109936.1-201ENST00000442089 460 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AL139011.1-201ENST00000442130 557 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC026202.1-201ENST00000443087 585 ntTSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RPL21P133-201ENST00000443666 476 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC097499.1-201ENST00000444277 208 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 LINC00323-203ENST00000446910 580 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 GSTM3P1-201ENST00000447621 574 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CDC42P2-201ENST00000448566 569 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 IP6K2-222ENST00000450045 689 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SURF6P1-201ENST00000451854 827 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 CSH1-203ENST00000453363 632 ntTSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 RPS27AP3-201ENST00000453803 454 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 SPATA3-208ENST00000455816 766 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC096915.1-201ENST00000456185 512 ntBASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 PET100-201ENST00000456958 219 ntTSL 2 BASIC2.11□□□□□ -2.07
KRTAP4-4Q9BYR3 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms