Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AC120036.2-201ENST00000509729 1474 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 OR2W4P-201ENST00000406496 926 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 RN7SKP144-201ENST00000411108 279 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 THEM7P-201ENST00000419556 672 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AC016027.5-201ENST00000427227 210 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AL354707.3-201ENST00000427308 331 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 IGLV3-4-201ENST00000432300 244 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 RPL29P23-201ENST00000486188 442 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AL035690.1-201ENST00000490892 383 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 RNU6-1334P-201ENST00000516032 105 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 RN7SKP248-201ENST00000516278 305 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 RNA5SP434-201ENST00000516647 121 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AC116917.1-201ENST00000520558 305 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AC121758.1-202ENST00000556917 658 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AP005136.2-201ENST00000583253 1049 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 RPSAP75-201ENST00000605848 301 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AC022106.1-201ENST00000612834 766 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AC005225.5-201ENST00000623547 2225 ntBASIC6.31□□□□□ -1.4
HDAC11Q96DB2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC11Q96DB2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AL035696.2-201ENST00000407941 709 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 RN7SKP108-201ENST00000411367 328 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 RPSAP32-201ENST00000432681 526 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 RPL23AP60-201ENST00000450011 454 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC008945.1-201ENST00000505144 499 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC008429.4-201ENST00000521201 182 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC007494.1-201ENST00000562293 760 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC141002.1-201ENST00000607025 279 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AL080312.2-201ENST00000613001 630 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AL138960.1-201ENST00000613838 513 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HDAC11Q96DB2 AC018717.1-201ENST00000457712 1505 ntBASIC6.3□□□□□ -1.4
HDAC11Q96DB2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 AC083837.1-201ENST00000565297 2994 ntBASIC6.29□□□□□ -1.4
HDAC11Q96DB2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 TPTE2P1-204ENST00000435256 593 ntBASIC6.29□□□□□ -1.4
HDAC11Q96DB2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.29□□□□□ -1.4
HDAC11Q96DB2 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.29□□□□□ -1.4
HDAC11Q96DB2 EEF1B2P3-201ENST00000447718 678 ntBASIC6.29□□□□□ -1.4
HDAC11Q96DB2 RAB28P2-201ENST00000454299 641 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms