Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 GTF2IP11-201ENST00000526931 420 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC124891.1-201ENST00000536322 519 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC092865.1-201ENST00000544395 1023 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC093510.2-201ENST00000562820 896 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AC079148.1-201ENST00000565944 819 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.96□□□□□ -1.3
HPS3Q969F9 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC026898.1-201ENST00000586404 571 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.96□□□□□ -1.3
HPS3Q969F9 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.96□□□□□ -1.3
HPS3Q969F9 AL355802.4-201ENST00000607635 548 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AC120053.1-201ENST00000607706 736 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 OR51C1P-201ENST00000608504 942 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AC006924.1-201ENST00000610750 559 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AL445493.3-201ENST00000619568 477 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.96□□□□□ -1.3
HPS3Q969F9 CASC19-246ENST00000641625 1606 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.96□□□□□ -1.3
HPS3Q969F9 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.96□□□□□ -1.3
HPS3Q969F9 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.96□□□□□ -1.3
HPS3Q969F9 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.96□□□□□ -1.3
HPS3Q969F9 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 WBP11P1-201ENST00000562560 1931 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 CASC19-238ENST00000641523 1558 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 AC009779.8-201ENST00000641684 4384 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.95□□□□□ -1.3
HPS3Q969F9 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
HPS3Q969F9 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.95□□□□□ -1.3
HPS3Q969F9 SNX18P3-202ENST00000565670 1750 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.95□□□□□ -1.3
HPS3Q969F9 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
HPS3Q969F9 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 RNA5SP350-201ENST00000363298 111 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 SNORD115-48-201ENST00000364764 76 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 AP003170.5-201ENST00000397185 335 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 AL133260.1-201ENST00000405720 405 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 RPL7AP51-201ENST00000422016 760 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 AL121882.1-201ENST00000422893 417 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 GAPDHP19-201ENST00000431768 1005 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.95□□□□□ -1.3
HPS3Q969F9 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HPS3Q969F9 CXCR2P1-202ENST00000443392 1074 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AL022237.1-201ENST00000446663 358 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.95□□□□□ -1.3
HPS3Q969F9 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.95□□□□□ -1.3
HPS3Q969F9 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AK4P6-201ENST00000505168 528 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.95□□□□□ -1.3
HPS3Q969F9 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.95□□□□□ -1.3
HPS3Q969F9 IGHV4-55-201ENST00000520889 368 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.95□□□□□ -1.3
HPS3Q969F9 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 OR4H6P-201ENST00000563771 921 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AC242628.1-201ENST00000606810 391 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 AL021368.3-201ENST00000607119 578 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 AL591167.1-201ENST00000607321 456 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 MIR6780B-201ENST00000610307 79 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.95□□□□□ -1.3
HPS3Q969F9 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AC022306.3-201ENST00000619930 550 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 MIR7159-201ENST00000620587 66 ntBASIC6.95□□□□□ -1.3
HPS3Q969F9 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
HPS3Q969F9 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.95□□□□□ -1.3
HPS3Q969F9 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HPS3Q969F9 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.95□□□□□ -1.3
HPS3Q969F9 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HPS3Q969F9 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms