Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
LYSMD3Q7Z3D4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 Y_RNA.18-201ENST00000362461 102 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 RNA5SP389-201ENST00000362610 115 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 RNA5SP226-201ENST00000362653 115 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 RNA5SP161-201ENST00000363871 115 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 RNA5SP149-201ENST00000364952 92 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 Y_RNA.356-201ENST00000365475 113 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 SSX9-201ENST00000376909 591 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 SNORA70I-201ENST00000384544 135 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 Y_RNA.548-201ENST00000384656 105 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 RAB5CP1-201ENST00000395972 580 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 MSRB1P1-201ENST00000396851 354 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 PYHIN5P-201ENST00000431627 723 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 MTND4LP10-201ENST00000435146 291 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AL606752.1-201ENST00000435442 666 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 OSTCP2-201ENST00000437956 444 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AL158214.1-201ENST00000444423 404 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 RPL7L1P11-201ENST00000446092 721 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 ATP5G1P6-201ENST00000451206 412 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC109454.1-201ENST00000471205 498 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 RPL7AP56-201ENST00000476420 791 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC114300.1-201ENST00000502347 280 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC079395.1-201ENST00000510981 262 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 Y_RNA.675-201ENST00000516389 149 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 SDHCP4-201ENST00000532834 510 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 MIR4637-201ENST00000582405 84 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC068790.7-201ENST00000602347 528 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 BNIP3P11-201ENST00000603878 563 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 SUMO2P14-201ENST00000604488 293 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC008277.2-201ENST00000605196 797 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC010538.1-201ENST00000615131 663 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 SLC20A1P2-201ENST00000618036 966 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC079684.1-201ENST00000621405 437 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC138649.3-201ENST00000622154 254 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AF001550.2-201ENST00000636643 217 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 MAPK10-281ENST00000641170 3070 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 AC079298.1-201ENST00000625026 1619 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 TRIM60P14-201ENST00000513444 1419 ntBASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.78□□□□□ -1.16
LYSMD3Q7Z3D4 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.77□□□□□ -1.16
LYSMD3Q7Z3D4 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
LYSMD3Q7Z3D4 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
LYSMD3Q7Z3D4 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.77□□□□□ -1.17
LYSMD3Q7Z3D4 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.77□□□□□ -1.17
LYSMD3Q7Z3D4 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms