Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 CD46-209ENST00000367047 3089 ntTSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RPS16P5-201ENST00000406501 404 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RN7SKP29-201ENST00000410957 272 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 SLC35E1P1-201ENST00000419313 864 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC092324.1-201ENST00000468671 324 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RN7SL459P-201ENST00000481078 302 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC083982.1-201ENST00000485679 344 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 MIR3934-201ENST00000579806 107 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AP000919.1-201ENST00000582850 985 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AL021918.2-201ENST00000613415 194 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC137056.2-201ENST00000624055 1958 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC100871.1-201ENST00000507871 1456 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 OR4C1P-202ENST00000641065 1569 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC126755.2-208ENST00000327792 462 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC138969.1-213ENST00000331436 462 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 RN7SKP104-201ENST00000362605 328 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AL133325.1-201ENST00000421090 382 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 COX6CP17-201ENST00000421389 185 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC004129.2-201ENST00000457229 287 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 OR5AZ1P-201ENST00000527448 943 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC126177.5-201ENST00000549599 178 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AL133406.3-201ENST00000606817 541 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC026464.2-201ENST00000567834 2421 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 OFD1P10Y-201ENST00000434110 1433 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AL035419.1-201ENST00000397037 564 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC117395.1-201ENST00000487390 403 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 ATP5J2P6-201ENST00000565203 266 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 MIR6780A-201ENST00000615089 68 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 AC016717.3-201ENST00000624730 554 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 SAMMSON-209ENST00000641222 1100 ntBASIC5.8□□□□□ -1.48
RIF1Q5UIP0 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RIF1Q5UIP0 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.79□□□□□ -1.48
RIF1Q5UIP0 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms