Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 LINC01808-203ENST00000641932 1643 ntBASIC4.56□□□□□ -1.68
CCL20P78556 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCL20P78556 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCL20P78556 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCL20P78556 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.56□□□□□ -1.68
CCL20P78556 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCL20P78556 AC120036.2-201ENST00000509729 1474 ntBASIC4.56□□□□□ -1.68
CCL20P78556 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCL20P78556 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
CCL20P78556 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CCL20P78556 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCL20P78556 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CCL20P78556 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CCL20P78556 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.55□□□□□ -1.68
CCL20P78556 FBXL21-201ENST00000297158 1305 ntBASIC4.55□□□□□ -1.68
CCL20P78556 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.55□□□□□ -1.68
CCL20P78556 TUBBP10-201ENST00000427668 1301 ntBASIC4.55□□□□□ -1.68
CCL20P78556 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.55□□□□□ -1.68
CCL20P78556 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.55□□□□□ -1.68
CCL20P78556 AC096921.1-201ENST00000411661 375 ntBASIC4.55□□□□□ -1.68
CCL20P78556 AC211486.3-201ENST00000412694 621 ntBASIC4.55□□□□□ -1.68
CCL20P78556 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.55□□□□□ -1.68
CCL20P78556 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.55□□□□□ -1.68
CCL20P78556 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC4.55□□□□□ -1.68
CCL20P78556 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 GYG1P2-201ENST00000426437 1006 ntBASIC4.55□□□□□ -1.68
CCL20P78556 AC112492.2-201ENST00000432774 1030 ntBASIC4.55□□□□□ -1.68
CCL20P78556 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.55□□□□□ -1.68
CCL20P78556 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.55□□□□□ -1.68
CCL20P78556 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.55□□□□□ -1.68
CCL20P78556 LINC02210-201ENST00000444561 288 ntBASIC4.55□□□□□ -1.68
CCL20P78556 POU5F1P5-201ENST00000445059 658 ntBASIC4.55□□□□□ -1.68
CCL20P78556 AKR1D1P1-201ENST00000457236 936 ntBASIC4.55□□□□□ -1.68
CCL20P78556 SNORD125-201ENST00000459538 96 ntBASIC4.55□□□□□ -1.68
CCL20P78556 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 GAPDHP38-201ENST00000503632 1002 ntBASIC4.55□□□□□ -1.68
CCL20P78556 ENPP7P11-201ENST00000505915 627 ntBASIC4.55□□□□□ -1.68
CCL20P78556 AC021193.1-201ENST00000511607 420 ntBASIC4.55□□□□□ -1.68
CCL20P78556 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.55□□□□□ -1.68
CCL20P78556 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.55□□□□□ -1.68
CCL20P78556 AC008055.1-201ENST00000547032 609 ntBASIC4.55□□□□□ -1.68
CCL20P78556 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.55□□□□□ -1.68
CCL20P78556 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.55□□□□□ -1.68
CCL20P78556 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.55□□□□□ -1.68
CCL20P78556 AC106730.2-201ENST00000566641 540 ntBASIC4.55□□□□□ -1.68
CCL20P78556 COX6CP7-201ENST00000597056 208 ntBASIC4.55□□□□□ -1.68
CCL20P78556 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.55□□□□□ -1.68
CCL20P78556 AL583832.1-201ENST00000603227 784 ntBASIC4.55□□□□□ -1.68
CCL20P78556 AL137000.1-201ENST00000610528 1244 ntBASIC4.55□□□□□ -1.68
CCL20P78556 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.55□□□□□ -1.68
CCL20P78556 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCL20P78556 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.55□□□□□ -1.68
CCL20P78556 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 AC006484.1-201ENST00000435086 1884 ntBASIC4.55□□□□□ -1.68
CCL20P78556 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCL20P78556 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCL20P78556 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 AC015689.2-201ENST00000528172 1738 ntBASIC4.55□□□□□ -1.68
CCL20P78556 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCL20P78556 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.55□□□□□ -1.68
CCL20P78556 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCL20P78556 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCL20P78556 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCL20P78556 AC005261.6-201ENST00000623072 1387 ntBASIC4.54□□□□□ -1.68
CCL20P78556 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCL20P78556 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCL20P78556 EIF3EP1-201ENST00000433978 1316 ntBASIC4.54□□□□□ -1.68
CCL20P78556 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.54□□□□□ -1.68
CCL20P78556 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CCL20P78556 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCL20P78556 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCL20P78556 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCL20P78556 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCL20P78556 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCL20P78556 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCL20P78556 RNA5SP346-201ENST00000363541 121 ntBASIC4.54□□□□□ -1.68
CCL20P78556 RN7SKP191-201ENST00000364713 306 ntBASIC4.54□□□□□ -1.68
CCL20P78556 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCL20P78556 AL139100.1-201ENST00000408001 498 ntBASIC4.54□□□□□ -1.68
CCL20P78556 SNORA11D-201ENST00000408548 128 ntBASIC4.54□□□□□ -1.68
CCL20P78556 SNORA11E-201ENST00000408778 128 ntBASIC4.54□□□□□ -1.68
CCL20P78556 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.54□□□□□ -1.68
CCL20P78556 DHFRP2-201ENST00000414224 547 ntBASIC4.54□□□□□ -1.68
CCL20P78556 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCL20P78556 AC099677.3-201ENST00000427081 395 ntBASIC4.54□□□□□ -1.68
CCL20P78556 AC009362.1-201ENST00000427253 406 ntBASIC4.54□□□□□ -1.68
CCL20P78556 SUMO2P8-201ENST00000434672 286 ntBASIC4.54□□□□□ -1.68
CCL20P78556 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.54□□□□□ -1.68
CCL20P78556 HIGD1AP16-201ENST00000450986 258 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms