Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NUP98P52948 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.23□□□□□ -1.25
NUP98P52948 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
NUP98P52948 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
NUP98P52948 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.23□□□□□ -1.25
NUP98P52948 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 AL139148.1-201ENST00000427122 680 ntBASIC7.23□□□□□ -1.25
NUP98P52948 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.23□□□□□ -1.25
NUP98P52948 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.23□□□□□ -1.25
NUP98P52948 AC100832.1-201ENST00000471945 383 ntBASIC7.23□□□□□ -1.25
NUP98P52948 RN7SL583P-201ENST00000475692 287 ntBASIC7.23□□□□□ -1.25
NUP98P52948 RN7SL570P-201ENST00000484405 292 ntBASIC7.23□□□□□ -1.25
NUP98P52948 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.23□□□□□ -1.25
NUP98P52948 MIR4260-201ENST00000583107 67 ntBASIC7.23□□□□□ -1.25
NUP98P52948 AC063977.5-201ENST00000601044 974 ntBASIC7.23□□□□□ -1.25
NUP98P52948 AC007204.2-201ENST00000615022 616 ntBASIC7.23□□□□□ -1.25
NUP98P52948 AC021766.1-201ENST00000624404 741 ntBASIC7.23□□□□□ -1.25
NUP98P52948 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NUP98P52948 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.23□□□□□ -1.25
NUP98P52948 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.23□□□□□ -1.25
NUP98P52948 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
NUP98P52948 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
NUP98P52948 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.23□□□□□ -1.25
NUP98P52948 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.23□□□□□ -1.25
NUP98P52948 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
NUP98P52948 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NUP98P52948 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 AC005224.3-201ENST00000584683 2140 ntBASIC7.23□□□□□ -1.25
NUP98P52948 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NUP98P52948 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NUP98P52948 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
NUP98P52948 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NUP98P52948 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NUP98P52948 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.22□□□□□ -1.25
NUP98P52948 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.22□□□□□ -1.25
NUP98P52948 AL445687.2-201ENST00000458156 728 ntBASIC7.22□□□□□ -1.25
NUP98P52948 RNU1-88P-201ENST00000459274 128 ntBASIC7.22□□□□□ -1.25
NUP98P52948 RPL35AP19-201ENST00000469425 329 ntBASIC7.22□□□□□ -1.25
NUP98P52948 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
NUP98P52948 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.22□□□□□ -1.25
NUP98P52948 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.22□□□□□ -1.25
NUP98P52948 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.22□□□□□ -1.25
NUP98P52948 RBM22P1-201ENST00000578589 1214 ntBASIC7.22□□□□□ -1.25
NUP98P52948 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.22□□□□□ -1.25
NUP98P52948 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.22□□□□□ -1.25
NUP98P52948 CASC19-222ENST00000641321 1173 ntBASIC7.22□□□□□ -1.25
NUP98P52948 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.22□□□□□ -1.25
NUP98P52948 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.22□□□□□ -1.25
NUP98P52948 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
NUP98P52948 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.22□□□□□ -1.25
NUP98P52948 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
NUP98P52948 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NUP98P52948 AURKAPS1-201ENST00000451805 1212 ntBASIC7.22□□□□□ -1.25
NUP98P52948 RN7SL352P-201ENST00000466002 277 ntBASIC7.22□□□□□ -1.25
NUP98P52948 RPS21P4-201ENST00000487122 248 ntBASIC7.22□□□□□ -1.25
NUP98P52948 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.22□□□□□ -1.25
NUP98P52948 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.22□□□□□ -1.25
NUP98P52948 TPM3P3-201ENST00000521343 354 ntBASIC7.22□□□□□ -1.25
NUP98P52948 AL139407.1-201ENST00000613826 1175 ntBASIC7.22□□□□□ -1.25
NUP98P52948 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.22□□□□□ -1.25
NUP98P52948 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NUP98P52948 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
NUP98P52948 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NUP98P52948 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NUP98P52948 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
NUP98P52948 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.22□□□□□ -1.25
NUP98P52948 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NUP98P52948 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.21□□□□□ -1.25
NUP98P52948 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NUP98P52948 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
NUP98P52948 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
NUP98P52948 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
NUP98P52948 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.21□□□□□ -1.25
NUP98P52948 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NUP98P52948 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NUP98P52948 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.21□□□□□ -1.26
NUP98P52948 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NUP98P52948 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.21□□□□□ -1.26
NUP98P52948 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
NUP98P52948 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
NUP98P52948 AC092106.1-201ENST00000444291 373 ntBASIC7.21□□□□□ -1.26
NUP98P52948 BX284632.1-201ENST00000478218 541 ntBASIC7.21□□□□□ -1.26
NUP98P52948 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.21□□□□□ -1.26
NUP98P52948 RPEP1-201ENST00000504507 658 ntBASIC7.21□□□□□ -1.26
NUP98P52948 AC105384.2-201ENST00000508433 640 ntBASIC7.21□□□□□ -1.26
NUP98P52948 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.21□□□□□ -1.26
NUP98P52948 AC021678.3-201ENST00000517893 476 ntBASIC7.21□□□□□ -1.26
NUP98P52948 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.21□□□□□ -1.26
NUP98P52948 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms