Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.65□□□□□ -1.34
NEK3P51956 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.65□□□□□ -1.34
NEK3P51956 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.65□□□□□ -1.34
NEK3P51956 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.65□□□□□ -1.34
NEK3P51956 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.65□□□□□ -1.34
NEK3P51956 TVP23CP1-201ENST00000450317 639 ntBASIC6.65□□□□□ -1.34
NEK3P51956 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.65□□□□□ -1.34
NEK3P51956 RN7SL741P-201ENST00000482473 289 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.65□□□□□ -1.34
NEK3P51956 RN7SL649P-201ENST00000496974 275 ntBASIC6.65□□□□□ -1.34
NEK3P51956 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.65□□□□□ -1.34
NEK3P51956 AC093664.1-201ENST00000511779 289 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.65□□□□□ -1.34
NEK3P51956 SNORA76.2-201ENST00000517095 137 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.65□□□□□ -1.34
NEK3P51956 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.65□□□□□ -1.34
NEK3P51956 AC090115.2-201ENST00000548060 883 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.65□□□□□ -1.34
NEK3P51956 SYPL1P2-201ENST00000582878 727 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.65□□□□□ -1.34
NEK3P51956 AL049840.5-201ENST00000602827 552 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AC016542.1-201ENST00000608259 493 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AL589743.6-201ENST00000611025 117 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AC021422.1-201ENST00000621212 473 ntBASIC6.65□□□□□ -1.34
NEK3P51956 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.65□□□□□ -1.34
NEK3P51956 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NEK3P51956 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NEK3P51956 AC010624.4-201ENST00000597606 1351 ntBASIC6.65□□□□□ -1.35
NEK3P51956 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NEK3P51956 AL033543.1-201ENST00000623440 13454 ntBASIC6.65□□□□□ -1.35
NEK3P51956 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
NEK3P51956 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
NEK3P51956 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.65□□□□□ -1.35
NEK3P51956 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.65□□□□□ -1.35
NEK3P51956 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 AL022323.4-201ENST00000623980 13120 ntBASIC6.64□□□□□ -1.35
NEK3P51956 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NEK3P51956 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NEK3P51956 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
NEK3P51956 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NEK3P51956 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.64□□□□□ -1.35
NEK3P51956 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.64□□□□□ -1.35
NEK3P51956 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NEK3P51956 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NEK3P51956 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 OR11H13P-201ENST00000359695 979 ntBASIC6.64□□□□□ -1.35
NEK3P51956 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 RNU1-46P-201ENST00000384425 164 ntBASIC6.64□□□□□ -1.35
NEK3P51956 MRPS21P5-201ENST00000417885 231 ntBASIC6.64□□□□□ -1.35
NEK3P51956 THEM7P-201ENST00000419556 672 ntBASIC6.64□□□□□ -1.35
NEK3P51956 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.64□□□□□ -1.35
NEK3P51956 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.64□□□□□ -1.35
NEK3P51956 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.64□□□□□ -1.35
NEK3P51956 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.64□□□□□ -1.35
NEK3P51956 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.64□□□□□ -1.35
NEK3P51956 AL020997.1-201ENST00000446554 349 ntBASIC6.64□□□□□ -1.35
NEK3P51956 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 MTCO1P31-201ENST00000506355 492 ntBASIC6.64□□□□□ -1.35
NEK3P51956 AC010468.3-201ENST00000508225 458 ntBASIC6.64□□□□□ -1.35
NEK3P51956 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.64□□□□□ -1.35
NEK3P51956 RN7SKP183-201ENST00000517169 324 ntBASIC6.64□□□□□ -1.35
NEK3P51956 AC008429.2-201ENST00000523057 864 ntBASIC6.64□□□□□ -1.35
NEK3P51956 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.64□□□□□ -1.35
NEK3P51956 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.64□□□□□ -1.35
NEK3P51956 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.64□□□□□ -1.35
NEK3P51956 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.64□□□□□ -1.35
NEK3P51956 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.64□□□□□ -1.35
NEK3P51956 SNX6P1-201ENST00000601728 1224 ntBASIC6.64□□□□□ -1.35
NEK3P51956 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.64□□□□□ -1.35
NEK3P51956 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.64□□□□□ -1.35
NEK3P51956 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.64□□□□□ -1.35
NEK3P51956 CASC19-228ENST00000641414 1684 ntBASIC6.64□□□□□ -1.35
NEK3P51956 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.64□□□□□ -1.35
NEK3P51956 NCOA4P2-201ENST00000340589 1813 ntBASIC6.64□□□□□ -1.35
NEK3P51956 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 AC007114.2-201ENST00000576014 4281 ntBASIC6.64□□□□□ -1.35
NEK3P51956 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.64□□□□□ -1.35
NEK3P51956 AC007342.7-201ENST00000624610 2337 ntBASIC6.64□□□□□ -1.35
NEK3P51956 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NEK3P51956 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.63□□□□□ -1.35
NEK3P51956 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.63□□□□□ -1.35
NEK3P51956 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NEK3P51956 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms