Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
GPC3P51654 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.73□□□□□ -1.33
GPC3P51654 SAMMSON-210ENST00000641260 1308 ntBASIC6.73□□□□□ -1.33
GPC3P51654 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.73□□□□□ -1.33
GPC3P51654 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
GPC3P51654 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.72□□□□□ -1.33
GPC3P51654 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
GPC3P51654 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
GPC3P51654 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.72□□□□□ -1.33
GPC3P51654 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.72□□□□□ -1.33
GPC3P51654 AC073109.1-201ENST00000445066 978 ntBASIC6.72□□□□□ -1.33
GPC3P51654 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.72□□□□□ -1.33
GPC3P51654 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.72□□□□□ -1.33
GPC3P51654 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.72□□□□□ -1.33
GPC3P51654 AC073594.1-201ENST00000462065 364 ntBASIC6.72□□□□□ -1.33
GPC3P51654 SCARNA18.1-201ENST00000516330 83 ntBASIC6.72□□□□□ -1.33
GPC3P51654 RNA5SP271-201ENST00000516700 88 ntBASIC6.72□□□□□ -1.33
GPC3P51654 SNORA81.2-201ENST00000516868 170 ntBASIC6.72□□□□□ -1.33
GPC3P51654 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.72□□□□□ -1.33
GPC3P51654 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.72□□□□□ -1.33
GPC3P51654 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.72□□□□□ -1.33
GPC3P51654 RNU4ATAC-201ENST00000580972 127 ntBASIC6.72□□□□□ -1.33
GPC3P51654 AC005244.1-201ENST00000582566 339 ntBASIC6.72□□□□□ -1.33
GPC3P51654 AL357562.1-201ENST00000624911 609 ntBASIC6.72□□□□□ -1.33
GPC3P51654 AC116667.2-201ENST00000641075 823 ntBASIC6.72□□□□□ -1.33
GPC3P51654 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
GPC3P51654 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.72□□□□□ -1.33
GPC3P51654 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 AC091305.2-201ENST00000624049 1576 ntBASIC6.72□□□□□ -1.33
GPC3P51654 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.72□□□□□ -1.33
GPC3P51654 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.72□□□□□ -1.33
GPC3P51654 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
GPC3P51654 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.72□□□□□ -1.33
GPC3P51654 AC073365.1-203ENST00000641055 1992 ntBASIC6.71□□□□□ -1.33
GPC3P51654 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
GPC3P51654 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
GPC3P51654 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
GPC3P51654 AF287957.1-201ENST00000607368 1595 ntBASIC6.71□□□□□ -1.34
GPC3P51654 TMSB4XP2-201ENST00000335179 210 ntBASIC6.71□□□□□ -1.34
GPC3P51654 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
GPC3P51654 RNA5SP251-201ENST00000410614 137 ntBASIC6.71□□□□□ -1.34
GPC3P51654 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.71□□□□□ -1.34
GPC3P51654 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.71□□□□□ -1.34
GPC3P51654 RPS15AP30-201ENST00000420976 390 ntBASIC6.71□□□□□ -1.34
GPC3P51654 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.71□□□□□ -1.34
GPC3P51654 RPL12P12-201ENST00000424633 501 ntBASIC6.71□□□□□ -1.34
GPC3P51654 GAPDHP75-201ENST00000433910 943 ntBASIC6.71□□□□□ -1.34
GPC3P51654 AC079922.1-201ENST00000443291 359 ntBASIC6.71□□□□□ -1.34
GPC3P51654 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
GPC3P51654 AC090589.1-201ENST00000473109 362 ntBASIC6.71□□□□□ -1.34
GPC3P51654 AC092865.4-201ENST00000477936 615 ntBASIC6.71□□□□□ -1.34
GPC3P51654 AC114781.3-201ENST00000512083 142 ntBASIC6.71□□□□□ -1.34
GPC3P51654 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.71□□□□□ -1.34
GPC3P51654 AP003080.1-202ENST00000526526 915 ntBASIC6.71□□□□□ -1.34
GPC3P51654 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.71□□□□□ -1.34
GPC3P51654 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.71□□□□□ -1.34
GPC3P51654 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.71□□□□□ -1.34
GPC3P51654 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.71□□□□□ -1.34
GPC3P51654 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.71□□□□□ -1.34
GPC3P51654 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.71□□□□□ -1.34
GPC3P51654 MIR3614-201ENST00000581261 86 ntBASIC6.71□□□□□ -1.34
GPC3P51654 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.71□□□□□ -1.34
GPC3P51654 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.71□□□□□ -1.34
GPC3P51654 MIR6793-201ENST00000612376 63 ntBASIC6.71□□□□□ -1.34
GPC3P51654 AC096861.1-201ENST00000616652 240 ntBASIC6.71□□□□□ -1.34
GPC3P51654 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
GPC3P51654 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.71□□□□□ -1.34
GPC3P51654 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
GPC3P51654 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.71□□□□□ -1.34
GPC3P51654 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.71□□□□□ -1.34
GPC3P51654 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
GPC3P51654 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
GPC3P51654 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
GPC3P51654 CCNT2P1-201ENST00000423082 1315 ntBASIC6.71□□□□□ -1.34
GPC3P51654 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
GPC3P51654 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.71□□□□□ -1.34
GPC3P51654 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.7□□□□□ -1.34
GPC3P51654 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.7□□□□□ -1.34
GPC3P51654 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.7□□□□□ -1.34
GPC3P51654 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
GPC3P51654 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
GPC3P51654 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
GPC3P51654 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
GPC3P51654 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.7□□□□□ -1.34
GPC3P51654 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
GPC3P51654 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
GPC3P51654 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms