Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HTTP42858 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.22□□□□□ -1.41
HTTP42858 AC093655.2-201ENST00000425735 631 ntBASIC6.22□□□□□ -1.41
HTTP42858 RSL24D1P6-201ENST00000426934 401 ntBASIC6.22□□□□□ -1.41
HTTP42858 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.22□□□□□ -1.41
HTTP42858 KNOP1P3-201ENST00000446933 426 ntBASIC6.22□□□□□ -1.41
HTTP42858 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HTTP42858 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.22□□□□□ -1.41
HTTP42858 BGLT3-201ENST00000564523 994 ntBASIC6.22□□□□□ -1.41
HTTP42858 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.22□□□□□ -1.41
HTTP42858 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.22□□□□□ -1.41
HTTP42858 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 UGT2B27P-201ENST00000505092 1620 ntBASIC6.22□□□□□ -1.41
HTTP42858 Z98755.1-201ENST00000407015 1384 ntBASIC6.22□□□□□ -1.41
HTTP42858 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HTTP42858 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
HTTP42858 AC009831.5-201ENST00000624000 3189 ntBASIC6.21□□□□□ -1.41
HTTP42858 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.41
HTTP42858 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.21□□□□□ -1.41
HTTP42858 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.21□□□□□ -1.41
HTTP42858 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
HTTP42858 RN7SKP6-201ENST00000364795 319 ntBASIC6.21□□□□□ -1.41
HTTP42858 RNU1-149P-201ENST00000390870 161 ntBASIC6.21□□□□□ -1.41
HTTP42858 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.21□□□□□ -1.41
HTTP42858 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.21□□□□□ -1.41
HTTP42858 RPL23AP40-201ENST00000487630 390 ntBASIC6.21□□□□□ -1.41
HTTP42858 AC004980.4-201ENST00000513375 203 ntBASIC6.21□□□□□ -1.41
HTTP42858 MIR2117-201ENST00000516780 80 ntBASIC6.21□□□□□ -1.41
HTTP42858 IGLV3-24-201ENST00000517477 197 ntBASIC6.21□□□□□ -1.41
HTTP42858 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.21□□□□□ -1.41
HTTP42858 AC078899.1-201ENST00000521432 1185 ntBASIC6.21□□□□□ -1.41
HTTP42858 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
HTTP42858 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.21□□□□□ -1.41
HTTP42858 AC024589.2-201ENST00000605642 1294 ntBASIC6.21□□□□□ -1.41
HTTP42858 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HTTP42858 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HTTP42858 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
HTTP42858 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HTTP42858 RN7SKP100-201ENST00000411258 284 ntBASIC6.21□□□□□ -1.42
HTTP42858 AC092570.3-201ENST00000420113 693 ntBASIC6.21□□□□□ -1.42
HTTP42858 CYP4F29P-201ENST00000420685 446 ntBASIC6.21□□□□□ -1.42
HTTP42858 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.21□□□□□ -1.42
HTTP42858 AC122718.1-201ENST00000439448 744 ntBASIC6.21□□□□□ -1.42
HTTP42858 AL513533.1-201ENST00000453728 415 ntBASIC6.21□□□□□ -1.42
HTTP42858 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.21□□□□□ -1.42
HTTP42858 FAM133DP-201ENST00000464802 691 ntBASIC6.21□□□□□ -1.42
HTTP42858 GCSHP4-201ENST00000538792 439 ntBASIC6.21□□□□□ -1.42
HTTP42858 AP002373.2-201ENST00000541631 1060 ntBASIC6.21□□□□□ -1.42
HTTP42858 AL161616.1-201ENST00000611867 286 ntBASIC6.21□□□□□ -1.42
HTTP42858 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HTTP42858 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
HTTP42858 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HTTP42858 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.21□□□□□ -1.42
HTTP42858 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.21□□□□□ -1.42
HTTP42858 LDHAP2-201ENST00000437325 985 ntBASIC6.21□□□□□ -1.42
HTTP42858 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.21□□□□□ -1.42
HTTP42858 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.21□□□□□ -1.42
HTTP42858 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.21□□□□□ -1.42
HTTP42858 OR11I1P-201ENST00000486033 954 ntBASIC6.21□□□□□ -1.42
HTTP42858 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.21□□□□□ -1.42
HTTP42858 RNA5SP373-201ENST00000517271 95 ntBASIC6.21□□□□□ -1.42
HTTP42858 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.21□□□□□ -1.42
HTTP42858 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.21□□□□□ -1.42
HTTP42858 AC139697.1-201ENST00000548429 745 ntBASIC6.21□□□□□ -1.42
HTTP42858 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.21□□□□□ -1.42
HTTP42858 AC010857.1-201ENST00000606398 594 ntBASIC6.21□□□□□ -1.42
HTTP42858 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HTTP42858 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HTTP42858 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HTTP42858 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HTTP42858 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HTTP42858 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 AC012313.8-201ENST00000595059 5402 ntBASIC6.2□□□□□ -1.42
HTTP42858 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HTTP42858 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HTTP42858 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HTTP42858 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.2□□□□□ -1.42
HTTP42858 NRBF2P2-201ENST00000413087 861 ntBASIC6.2□□□□□ -1.42
HTTP42858 FAM96AP1-201ENST00000430879 482 ntBASIC6.2□□□□□ -1.42
HTTP42858 AC073072.2-201ENST00000447425 348 ntBASIC6.2□□□□□ -1.42
HTTP42858 MIR4270-201ENST00000581799 70 ntBASIC6.2□□□□□ -1.42
HTTP42858 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HTTP42858 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HTTP42858 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HTTP42858 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms