Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC12P31275 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC12P31275 AF131215.2-201ENST00000531549 1710 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
HOXC12P31275 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 Y_RNA.465-201ENST00000384293 102 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC090114.1-201ENST00000393266 448 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 NUS1P4-201ENST00000401550 585 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AL355379.1-201ENST00000405542 640 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 TYMSP1-201ENST00000407851 869 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 FTOP1-201ENST00000419363 861 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXC12P31275 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC12P31275 AC010153.1-201ENST00000432862 727 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 AC244505.2-201ENST00000435089 759 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 SYPL1P1-201ENST00000473622 768 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC005017.1-201ENST00000482002 490 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC008799.2-201ENST00000484429 647 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 LINC00888-204ENST00000487386 421 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC12P31275 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 AC092349.1-201ENST00000504903 310 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 AC113191.1-201ENST00000517759 403 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC12P31275 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 HMGN1P26-201ENST00000558737 303 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 UBE2CP4-201ENST00000561405 535 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AADACP1-206ENST00000561502 1193 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC095057.3-201ENST00000567102 1157 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 ATP5F1P7-201ENST00000567330 760 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC12P31275 AL583832.1-201ENST00000603227 784 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 SNX29P2-204ENST00000603801 875 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 DUXAP11-201ENST00000603858 526 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC004852.1-201ENST00000605206 154 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC12P31275 SNORD91A-202ENST00000609620 191 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AL159169.2-201ENST00000610061 1269 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC122133.1-201ENST00000613964 233 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 AC105227.2-201ENST00000615075 605 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXC12P31275 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 SPATA2P1-201ENST00000431223 2055 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.54□□□□□ -1.36
HOXC12P31275 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HOXC12P31275 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC12P31275 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC12P31275 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC12P31275 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HOXC12P31275 RNA5SP260-201ENST00000363849 111 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 RNU6-157P-201ENST00000383957 107 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC12P31275 RSL24D1P4-201ENST00000400938 484 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 Y_RNA.599-201ENST00000410489 109 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC020983.1-201ENST00000417063 543 ntBASIC6.53□□□□□ -1.36
HOXC12P31275 AC127537.1-201ENST00000418183 748 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms