Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC8P31273 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC8P31273 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC8P31273 AC022404.1-201ENST00000555320 273 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 AC007225.2-201ENST00000562529 256 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 AC015802.2-201ENST00000589690 189 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC8P31273 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 AL591848.4-201ENST00000567832 3472 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC8P31273 CDY5P-201ENST00000411487 1580 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 CDY9P-201ENST00000451397 1580 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 AC130360.2-201ENST00000533477 1556 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC8P31273 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 AC005618.1-201ENST00000606901 3148 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 AL161901.1-201ENST00000624954 3425 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC8P31273 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC8P31273 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
HOXC8P31273 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC8P31273 AC006213.6-201ENST00000623722 4179 ntBASIC6.59□□□□□ -1.35
HOXC8P31273 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
HOXC8P31273 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.59□□□□□ -1.36
HOXC8P31273 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
HOXC8P31273 RARSP1-201ENST00000542842 1418 ntBASIC6.59□□□□□ -1.36
HOXC8P31273 LINC01616-201ENST00000561816 2280 ntBASIC6.59□□□□□ -1.36
HOXC8P31273 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC8P31273 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC8P31273 CCNT2P1-201ENST00000423082 1315 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
HOXC8P31273 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HOXC8P31273 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC8P31273 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HOXC8P31273 OR10R3P-201ENST00000361688 942 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 RNA5SP46-201ENST00000362370 120 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 RNA5SP394-201ENST00000364216 119 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 RNA5SP132-201ENST00000364725 118 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HOXC8P31273 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC8P31273 AL391422.1-201ENST00000402155 436 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 SNRPEP6-201ENST00000407465 277 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC8P31273 RN7SKP166-201ENST00000410812 305 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 AL513325.1-201ENST00000417716 1034 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.58□□□□□ -1.36
HOXC8P31273 AK4P4-201ENST00000419465 646 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC8P31273 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC8P31273 AL451136.1-201ENST00000435399 325 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC8P31273 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC8P31273 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC8P31273 SDC4P-201ENST00000453285 601 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC8P31273 AC074087.1-201ENST00000512059 724 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.58□□□□□ -1.36
HOXC8P31273 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC8P31273 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC8P31273 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC8P31273 OR4A40P-201ENST00000533878 948 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 DPPA2P4-201ENST00000563717 878 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 AC104695.2-201ENST00000605056 775 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 RN7SL544P-201ENST00000617232 284 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 RN7SL763P-201ENST00000620922 284 ntBASIC6.58□□□□□ -1.36
HOXC8P31273 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC8P31273 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC8P31273 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
HOXC8P31273 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
HOXC8P31273 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.58□□□□□ -1.36
HOXC8P31273 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HOXC8P31273 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
HOXC8P31273 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC8P31273 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC8P31273 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC8P31273 AC241584.2-201ENST00000637142 2090 ntBASIC6.57□□□□□ -1.36
HOXC8P31273 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HOXC8P31273 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC8P31273 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC8P31273 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms