Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 AC011416.1-201ENST00000514947 1732 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN6P29350 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN6P29350 AL355834.1-201ENST00000556602 3965 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
PTPN6P29350 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN6P29350 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN6P29350 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN6P29350 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN6P29350 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN6P29350 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 RNA5SP346-201ENST00000363541 121 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTPN6P29350 SNORA81-201ENST00000408493 178 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 MIR1275-201ENST00000408770 80 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN6P29350 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN6P29350 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN6P29350 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN6P29350 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN6P29350 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN6P29350 AL354893.1-201ENST00000433735 348 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 GAPDHP59-201ENST00000435908 267 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 PPIAP10-201ENST00000438675 458 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 CXCR2P1-202ENST00000443392 1074 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.79□□□□□ -1.48
PTPN6P29350 OR2A3P-201ENST00000493774 953 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 TOMM22P4-201ENST00000511318 336 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN6P29350 RN7SKP5-201ENST00000517045 272 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN6P29350 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.79□□□□□ -1.48
PTPN6P29350 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 MIR3154-201ENST00000577829 84 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN6P29350 AL135999.3-201ENST00000610501 812 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 RN7SL261P-201ENST00000613441 282 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 uc_338.31-201ENST00000615595 186 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 AL591926.1-201ENST00000620542 217 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN6P29350 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 AC016583.1-201ENST00000624221 2431 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 AC093297.3-201ENST00000607056 2517 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 CASC19-255ENST00000641733 1385 ntBASIC5.79□□□□□ -1.48
PTPN6P29350 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN6P29350 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.78□□□□□ -1.48
PTPN6P29350 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.78□□□□□ -1.48
PTPN6P29350 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PTPN6P29350 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 SNORD1C-201ENST00000363315 78 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN6P29350 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PTPN6P29350 YWHAZP6-201ENST00000399764 738 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AL139805.1-201ENST00000407837 289 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 RPL12P16-201ENST00000431098 498 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 NPM1P48-201ENST00000436002 853 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN6P29350 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.78□□□□□ -1.48
PTPN6P29350 RPL23AP60-201ENST00000450011 454 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AL162739.1-201ENST00000450606 307 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AC118758.1-202ENST00000454719 225 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AL133351.3-201ENST00000454998 193 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AC104849.1-201ENST00000462623 405 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AC104339.1-201ENST00000465478 348 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN6P29350 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.78□□□□□ -1.48
PTPN6P29350 AC018797.1-201ENST00000510791 255 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 ZNF519P4-201ENST00000514008 125 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 RNA5SP473-201ENST00000516402 125 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 RN7SKP70-201ENST00000516655 271 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 RNA5SP441-201ENST00000516809 88 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN6P29350 TPM3P3-201ENST00000521343 354 ntBASIC5.78□□□□□ -1.48
PTPN6P29350 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.78□□□□□ -1.48
PTPN6P29350 NPM1P42-201ENST00000560329 862 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms