Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.01□□□□□ -1.29
COL8A1P27658 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.01□□□□□ -1.29
COL8A1P27658 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.01□□□□□ -1.29
COL8A1P27658 MIR3171-201ENST00000584270 74 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 MIR548AB-201ENST00000584917 84 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 NRBF2P5-201ENST00000603087 788 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC129492.5-201ENST00000603489 315 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AL391903.2-201ENST00000614532 247 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 pRNA.9-201ENST00000618609 89 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AL603758.1-201ENST00000618654 241 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 AC116563.2-201ENST00000624751 535 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 MIR1321-201ENST00000637766 79 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 OR52B5P-202ENST00000641118 1110 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC7.01□□□□□ -1.29
COL8A1P27658 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL8A1P27658 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 CSTF3-AS1-201ENST00000500025 2031 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 PABPC1P9-201ENST00000426076 1612 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 GLDCP1-201ENST00000510885 2678 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.01□□□□□ -1.29
COL8A1P27658 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 MAPK10-313ENST00000641405 2469 ntBASIC7.01□□□□□ -1.29
COL8A1P27658 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC7.01□□□□□ -1.29
COL8A1P27658 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL8A1P27658 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC7□□□□□ -1.29
COL8A1P27658 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7□□□□□ -1.29
COL8A1P27658 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 ACTBP13-201ENST00000423971 3959 ntBASIC7□□□□□ -1.29
COL8A1P27658 AL008638.3-201ENST00000623027 5182 ntBASIC7□□□□□ -1.29
COL8A1P27658 FOLH1B-202ENST00000529567 2145 ntBASIC7□□□□□ -1.29
COL8A1P27658 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC7□□□□□ -1.29
COL8A1P27658 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC7□□□□□ -1.29
COL8A1P27658 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7□□□□□ -1.29
COL8A1P27658 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 RNU6-845P-201ENST00000362578 103 ntBASIC7□□□□□ -1.29
COL8A1P27658 Y_RNA.146-201ENST00000363549 102 ntBASIC7□□□□□ -1.29
COL8A1P27658 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7□□□□□ -1.29
COL8A1P27658 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
COL8A1P27658 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7□□□□□ -1.29
COL8A1P27658 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 MIR548P-201ENST00000408336 84 ntBASIC7□□□□□ -1.29
COL8A1P27658 RAB28P1-201ENST00000411517 641 ntBASIC7□□□□□ -1.29
COL8A1P27658 AL773545.3-201ENST00000414297 706 ntBASIC7□□□□□ -1.29
COL8A1P27658 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC7□□□□□ -1.29
COL8A1P27658 ZNF90P2-204ENST00000419323 1075 ntBASIC7□□□□□ -1.29
COL8A1P27658 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC7□□□□□ -1.29
COL8A1P27658 FAM183DP-201ENST00000421987 399 ntBASIC7□□□□□ -1.29
COL8A1P27658 AL589794.1-201ENST00000424971 390 ntBASIC7□□□□□ -1.29
COL8A1P27658 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7□□□□□ -1.29
COL8A1P27658 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7□□□□□ -1.29
COL8A1P27658 ARPC3P5-201ENST00000448802 534 ntBASIC7□□□□□ -1.29
COL8A1P27658 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7□□□□□ -1.29
COL8A1P27658 AL591363.1-201ENST00000450091 483 ntBASIC7□□□□□ -1.29
COL8A1P27658 PPP1R8P1-201ENST00000452549 1044 ntBASIC7□□□□□ -1.29
COL8A1P27658 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7□□□□□ -1.29
COL8A1P27658 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL8A1P27658 RN7SL836P-201ENST00000476140 296 ntBASIC7□□□□□ -1.29
COL8A1P27658 AF305872.1-201ENST00000485217 471 ntBASIC7□□□□□ -1.29
COL8A1P27658 RN7SL649P-201ENST00000496974 275 ntBASIC7□□□□□ -1.29
COL8A1P27658 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7□□□□□ -1.29
COL8A1P27658 DUTP7-201ENST00000507982 486 ntBASIC7□□□□□ -1.29
COL8A1P27658 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7□□□□□ -1.29
COL8A1P27658 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7□□□□□ -1.29
COL8A1P27658 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7□□□□□ -1.29
COL8A1P27658 AC004817.2-201ENST00000561794 651 ntBASIC7□□□□□ -1.29
COL8A1P27658 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7□□□□□ -1.29
COL8A1P27658 LSM3P5-201ENST00000566307 306 ntBASIC7□□□□□ -1.29
COL8A1P27658 MIR5708-201ENST00000579723 85 ntBASIC7□□□□□ -1.29
COL8A1P27658 AC012254.4-201ENST00000588843 273 ntBASIC7□□□□□ -1.29
COL8A1P27658 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7□□□□□ -1.29
COL8A1P27658 VN1R80P-201ENST00000597126 338 ntBASIC7□□□□□ -1.29
COL8A1P27658 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7□□□□□ -1.29
COL8A1P27658 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC7□□□□□ -1.29
COL8A1P27658 AL035413.2-201ENST00000604801 525 ntBASIC7□□□□□ -1.29
COL8A1P27658 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms