Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
VARSP26640 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 RNU6-839P-201ENST00000363347 108 ntBASIC7.99□□□□□ -1.13
VARSP26640 RNU6-621P-201ENST00000364752 109 ntBASIC7.99□□□□□ -1.13
VARSP26640 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC7.99□□□□□ -1.13
VARSP26640 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.99□□□□□ -1.13
VARSP26640 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
VARSP26640 RPSAP42-201ENST00000403415 878 ntBASIC7.99□□□□□ -1.13
VARSP26640 RPL10P10-201ENST00000403509 664 ntBASIC7.99□□□□□ -1.13
VARSP26640 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 AL109918.1-202ENST00000406724 436 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.99□□□□□ -1.13
VARSP26640 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.99□□□□□ -1.13
VARSP26640 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.99□□□□□ -1.13
VARSP26640 RPSAP32-201ENST00000432681 526 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC002542.1-201ENST00000440683 193 ntBASIC7.99□□□□□ -1.13
VARSP26640 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.99□□□□□ -1.13
VARSP26640 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 AL033528.1-201ENST00000453780 140 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC022364.2-201ENST00000457963 554 ntBASIC7.99□□□□□ -1.13
VARSP26640 SULT1D1P-201ENST00000458020 882 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 SRP72-202ENST00000504757 745 ntTSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.99□□□□□ -1.13
VARSP26640 AC112225.1-201ENST00000508230 297 ntBASIC7.99□□□□□ -1.13
VARSP26640 RNU6-430P-201ENST00000517078 107 ntBASIC7.99□□□□□ -1.13
VARSP26640 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.99□□□□□ -1.13
VARSP26640 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC7.99□□□□□ -1.13
VARSP26640 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.99□□□□□ -1.13
VARSP26640 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 AC034268.2-201ENST00000571784 482 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC087393.3-201ENST00000584971 166 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC005262.1-201ENST00000588562 362 ntBASIC7.99□□□□□ -1.13
VARSP26640 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC7.99□□□□□ -1.13
VARSP26640 AC069304.2-201ENST00000605154 435 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC011373.1-201ENST00000607270 237 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC106782.6-201ENST00000611264 512 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC015922.4-201ENST00000612568 690 ntBASIC7.99□□□□□ -1.13
VARSP26640 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC7.99□□□□□ -1.13
VARSP26640 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.99□□□□□ -1.13
VARSP26640 AL139089.1-201ENST00000620372 975 ntBASIC7.99□□□□□ -1.13
VARSP26640 AC018692.2-201ENST00000624130 348 ntBASIC7.99□□□□□ -1.13
VARSP26640 RPSAP68-201ENST00000625020 438 ntBASIC7.99□□□□□ -1.13
VARSP26640 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
VARSP26640 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 AC117529.2-201ENST00000512159 2068 ntBASIC7.99□□□□□ -1.13
VARSP26640 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
VARSP26640 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 AC109315.1-201ENST00000584143 1347 ntBASIC7.99□□□□□ -1.13
VARSP26640 BCL9P1-201ENST00000506012 2561 ntBASIC7.99□□□□□ -1.13
VARSP26640 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.99□□□□□ -1.13
VARSP26640 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.99□□□□□ -1.13
VARSP26640 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
VARSP26640 AL136146.1-201ENST00000529830 1667 ntBASIC7.98□□□□□ -1.13
VARSP26640 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.98□□□□□ -1.13
VARSP26640 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.98□□□□□ -1.13
VARSP26640 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.98□□□□□ -1.13
VARSP26640 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
VARSP26640 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.98□□□□□ -1.13
VARSP26640 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VARSP26640 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 Y_RNA.216-201ENST00000364205 93 ntBASIC7.98□□□□□ -1.13
VARSP26640 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VARSP26640 MIR142-201ENST00000384835 87 ntBASIC7.98□□□□□ -1.13
VARSP26640 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VARSP26640 SNORA57.2-201ENST00000391265 128 ntBASIC7.98□□□□□ -1.13
VARSP26640 EEF1GP6-201ENST00000402309 905 ntBASIC7.98□□□□□ -1.13
VARSP26640 AC010385.1-201ENST00000412374 256 ntBASIC7.98□□□□□ -1.13
VARSP26640 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.98□□□□□ -1.13
VARSP26640 RPS7P8-201ENST00000418311 581 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms