Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.46□□□□□ -1.38
O00370 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
O00370 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
O00370 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.45□□□□□ -1.38
O00370 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.45□□□□□ -1.38
O00370 RBMY1HP-201ENST00000382759 1389 ntBASIC6.45□□□□□ -1.38
O00370 AL354854.1-201ENST00000455940 1363 ntBASIC6.45□□□□□ -1.38
O00370 AP000432.2-201ENST00000624164 2048 ntBASIC6.45□□□□□ -1.38
O00370 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.45□□□□□ -1.38
O00370 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
O00370 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
O00370 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.45□□□□□ -1.38
O00370 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
O00370 AC099535.1-201ENST00000408928 371 ntBASIC6.45□□□□□ -1.38
O00370 AC092651.1-201ENST00000426110 312 ntBASIC6.45□□□□□ -1.38
O00370 AC016027.5-201ENST00000427227 210 ntBASIC6.45□□□□□ -1.38
O00370 AL121578.1-201ENST00000428051 892 ntBASIC6.45□□□□□ -1.38
O00370 RPSAP40-201ENST00000442343 891 ntBASIC6.45□□□□□ -1.38
O00370 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.45□□□□□ -1.38
O00370 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.45□□□□□ -1.38
O00370 FTLP8-201ENST00000446770 267 ntBASIC6.45□□□□□ -1.38
O00370 AL445687.2-201ENST00000458156 728 ntBASIC6.45□□□□□ -1.38
O00370 AC117394.1-201ENST00000477323 567 ntBASIC6.45□□□□□ -1.38
O00370 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.45□□□□□ -1.38
O00370 AC122718.2-201ENST00000505325 591 ntBASIC6.45□□□□□ -1.38
O00370 AL158068.1-201ENST00000506116 616 ntBASIC6.45□□□□□ -1.38
O00370 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.45□□□□□ -1.38
O00370 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.45□□□□□ -1.38
O00370 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.45□□□□□ -1.38
O00370 TPM3P3-201ENST00000521343 354 ntBASIC6.45□□□□□ -1.38
O00370 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.45□□□□□ -1.38
O00370 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
O00370 AC107958.1-201ENST00000556576 290 ntBASIC6.45□□□□□ -1.38
O00370 AC092332.1-201ENST00000563684 829 ntBASIC6.45□□□□□ -1.38
O00370 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.45□□□□□ -1.38
O00370 AL645933.2-201ENST00000606743 1207 ntBASIC6.45□□□□□ -1.38
O00370 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.45□□□□□ -1.38
O00370 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.45□□□□□ -1.38
O00370 AC096861.1-201ENST00000616652 240 ntBASIC6.45□□□□□ -1.38
O00370 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.45□□□□□ -1.38
O00370 AL353684.1-201ENST00000622677 1120 ntBASIC6.45□□□□□ -1.38
O00370 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.45□□□□□ -1.38
O00370 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.45□□□□□ -1.38
O00370 HSPD1P9-201ENST00000420325 1636 ntBASIC6.45□□□□□ -1.38
O00370 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
O00370 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
O00370 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
O00370 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
O00370 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.44□□□□□ -1.38
O00370 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
O00370 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
O00370 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
O00370 AC016583.1-201ENST00000624221 2431 ntBASIC6.44□□□□□ -1.38
O00370 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
O00370 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
O00370 RN7SKP187-201ENST00000365536 330 ntBASIC6.44□□□□□ -1.38
O00370 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.44□□□□□ -1.38
O00370 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.44□□□□□ -1.38
O00370 AC007679.3-201ENST00000434035 414 ntBASIC6.44□□□□□ -1.38
O00370 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
O00370 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.44□□□□□ -1.38
O00370 RBMY2BP-202ENST00000451071 1156 ntBASIC6.44□□□□□ -1.38
O00370 RAB28P2-201ENST00000454299 641 ntBASIC6.44□□□□□ -1.38
O00370 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.44□□□□□ -1.38
O00370 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.44□□□□□ -1.38
O00370 AC008429.4-201ENST00000521201 182 ntBASIC6.44□□□□□ -1.38
O00370 OR7E158P-201ENST00000524483 910 ntBASIC6.44□□□□□ -1.38
O00370 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.44□□□□□ -1.38
O00370 AC006512.2-201ENST00000543250 486 ntBASIC6.44□□□□□ -1.38
O00370 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.44□□□□□ -1.38
O00370 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.44□□□□□ -1.38
O00370 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.44□□□□□ -1.38
O00370 AC119403.2-201ENST00000590960 598 ntBASIC6.44□□□□□ -1.38
O00370 AC004890.3-201ENST00000605566 1095 ntBASIC6.44□□□□□ -1.38
O00370 AC092681.3-201ENST00000609463 678 ntBASIC6.44□□□□□ -1.38
O00370 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.44□□□□□ -1.38
O00370 MIR7109-201ENST00000613748 65 ntBASIC6.44□□□□□ -1.38
O00370 AC004801.6-201ENST00000616571 978 ntBASIC6.44□□□□□ -1.38
O00370 AL357562.1-201ENST00000624911 609 ntBASIC6.44□□□□□ -1.38
O00370 AC073488.3-201ENST00000631611 778 ntBASIC6.44□□□□□ -1.38
O00370 AC104966.1-201ENST00000467010 1464 ntBASIC6.44□□□□□ -1.38
O00370 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.44□□□□□ -1.38
O00370 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
O00370 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
O00370 AP002512.4-202ENST00000641599 4530 ntBASIC6.44□□□□□ -1.38
O00370 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
O00370 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms