Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 THEM7P-201ENST00000419556 672 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 ARMC4P1-201ENST00000438905 707 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC023512.1-201ENST00000444513 499 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 RN7SKP183-201ENST00000517169 324 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC109635.6-201ENST00000525487 1113 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC124891.1-201ENST00000536322 519 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 RN7SL208P-201ENST00000577964 296 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 SYPL1P2-201ENST00000582878 727 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AL137246.2-201ENST00000613439 662 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC022306.3-201ENST00000619930 550 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AP001885.1-201ENST00000621658 558 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AL596275.2-207ENST00000641188 675 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AL669831.5-218ENST00000591702 1873 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 AC007382.1-201ENST00000624376 2618 ntBASIC7.28□□□□□ -1.24
COL4A3BPQ9Y5P4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.24
COL4A3BPQ9Y5P4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
COL4A3BPQ9Y5P4 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC023245.2-201ENST00000530760 2978 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC140479.2-201ENST00000421567 3130 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU4-7P-201ENST00000364758 141 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 RNU1-84P-201ENST00000365447 164 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AL355143.1-201ENST00000407101 841 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AL023284.3-201ENST00000407767 334 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 RPA2P2-201ENST00000419698 796 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 CYCSP52-201ENST00000422857 310 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 SEC63P1-201ENST00000425785 1258 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AL512637.2-201ENST00000431287 1256 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC236972.4-201ENST00000458091 963 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 RPL23AP64-201ENST00000469465 435 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 H3F3AP3-201ENST00000497682 407 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 BTG4P1-201ENST00000510421 183 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC027667.1-201ENST00000545814 304 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC063977.7-201ENST00000594454 337 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC004805.3-201ENST00000603178 310 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC011891.2-201ENST00000604949 397 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC097467.4-201ENST00000605504 141 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC004241.3-201ENST00000611728 517 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC012676.3-201ENST00000614983 479 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 U1.41-201ENST00000617626 165 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AP001264.1-201ENST00000620602 703 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AL049777.1-201ENST00000622740 518 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC010624.4-201ENST00000597606 1351 ntBASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
COL4A3BPQ9Y5P4 AC010401.2-201ENST00000575137 4934 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms