Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC9.38□□□□□ -0.91
PDZRN3Q9UPQ7 UGT2B25P-201ENST00000511504 1586 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 ARHGAP42P4-201ENST00000549782 2934 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 Y_RNA.509-201ENST00000384506 99 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC064862.5-201ENST00000440618 334 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 EEF1E1P1-201ENST00000446998 430 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 PPIAP32-201ENST00000449940 472 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC023424.2-201ENST00000493479 777 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC092960.1-201ENST00000604762 351 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AP002802.2-201ENST00000605877 235 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC093673.2-201ENST00000609674 331 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 Y_RNA.812-201ENST00000610788 101 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 Y_RNA.784-201ENST00000613803 101 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AC122133.1-201ENST00000613964 233 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 Y_RNA.787-201ENST00000616522 101 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 Y_RNA.780-201ENST00000617336 101 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 Y_RNA.801-201ENST00000619005 101 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AL713922.2-201ENST00000619384 716 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 AL359922.2-201ENST00000581788 3017 ntBASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
PDZRN3Q9UPQ7 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 SF3A3P1-201ENST00000446317 1477 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 RNU6-553P-201ENST00000364047 96 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AC136624.1-201ENST00000400791 413 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 MTND2P23-201ENST00000422990 651 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 TRIM60P10Y-201ENST00000425589 751 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 KCTD9P1-201ENST00000430462 1167 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 PSMD8P1-201ENST00000436275 769 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 HMGB1P31-201ENST00000437242 427 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 IGKV1OR2-2-201ENST00000451163 355 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 RARRES2P3-201ENST00000457739 473 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AC084878.1-201ENST00000480555 648 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AC011037.1-201ENST00000483964 558 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 NDUFA5P12-201ENST00000503796 343 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AC114967.1-201ENST00000504890 259 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AP003084.1-201ENST00000524828 742 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 MED28P5-201ENST00000528254 438 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AP001646.2-201ENST00000528645 1156 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 CHEK2P2-201ENST00000554701 672 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms