Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC079298.1-201ENST00000625026 1619 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC007382.1-201ENST00000624376 2618 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 SNORA63.3-201ENST00000362682 132 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 RNU1-65P-201ENST00000363919 148 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 MIR640-201ENST00000385086 96 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 MIR137-201ENST00000385223 102 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 ATP5F1P6-201ENST00000402768 767 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 AL049697.3-201ENST00000406493 982 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 MIR1282-201ENST00000408865 101 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AL139158.1-201ENST00000424719 340 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 HSFY7P-201ENST00000432672 318 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 PTP4A1P3-201ENST00000433661 420 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 HSFY8P-201ENST00000437934 318 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC097359.1-201ENST00000447946 463 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 HSFY5P-201ENST00000453726 309 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 SULT1D1P-201ENST00000458020 882 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC104339.1-201ENST00000465478 348 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 OR7E22P-201ENST00000478335 1035 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC009729.1-201ENST00000548873 1133 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 MIR3154-201ENST00000577829 84 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC131009.3-201ENST00000621809 287 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 AL683826.1-201ENST00000624104 627 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 AP000577.1-201ENST00000624366 878 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.07□□□□□ -1.44
LRFN1Q9P244 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 WBP11P1-201ENST00000562560 1931 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC007342.7-201ENST00000624610 2337 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 AC006213.6-201ENST00000623722 4179 ntBASIC6.07□□□□□ -1.44
LRFN1Q9P244 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRFN1Q9P244 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LRFN1Q9P244 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LRFN1Q9P244 AP003486.1-201ENST00000525716 3994 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRFN1Q9P244 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LRFN1Q9P244 RNU6-729P-201ENST00000384399 107 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LRFN1Q9P244 PSMA6P1-201ENST00000400275 741 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LRFN1Q9P244 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 MRPS21P5-201ENST00000417885 231 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LRFN1Q9P244 AL020997.1-201ENST00000446554 349 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 CEACAMP5-201ENST00000448037 961 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 RN7SL39P-201ENST00000462264 297 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 AC122718.2-201ENST00000505325 591 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 AC095057.1-201ENST00000507583 168 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 IGHV3-63-201ENST00000518422 341 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 AC008429.2-201ENST00000523057 864 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 OR56A7P-201ENST00000524865 941 ntBASIC6.06□□□□□ -1.44
LRFN1Q9P244 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.06□□□□□ -1.44
LRFN1Q9P244 MTND5P21-201ENST00000531961 522 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms