Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 MIR3689F-201ENST00000579617 66 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 WDR45BP1-201ENST00000583470 1029 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AL360085.1-201ENST00000604713 532 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 7SK.12-201ENST00000612820 244 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 CTAGE3P-201ENST00000454280 2404 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 TEX21P-201ENST00000447107 1476 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC110998.1-201ENST00000519029 2053 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 NF1P2-201ENST00000556855 2505 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 TTC39DP-201ENST00000416781 1688 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 HSPD1P1-201ENST00000503199 1726 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC114786.2-201ENST00000510090 1426 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 snoZ40.1-201ENST00000364540 72 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 RN7SKP1-201ENST00000365525 307 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 OR1L1-202ENST00000373686 1083 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 FCF1P10-201ENST00000407590 479 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 MIR1272-201ENST00000408106 129 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 IGLC6-201ENST00000410078 317 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 PRPS1P2-201ENST00000430496 937 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC013267.1-201ENST00000458227 267 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 NUTF2P4-201ENST00000458353 381 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 RN7SL706P-201ENST00000460079 292 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 MTND6P6-201ENST00000478031 263 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 SNRPD2P1-201ENST00000489253 354 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 SUMO2P4-201ENST00000504193 276 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC107385.1-201ENST00000507985 778 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 Y_RNA.675-201ENST00000516389 149 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AL392112.1-201ENST00000605115 829 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC243772.3-202ENST00000609662 1148 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AL109933.4-201ENST00000612111 157 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 MIR6723-201ENST00000621981 89 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AC012414.7-202ENST00000622705 1090 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 AL365475.1-201ENST00000565135 1949 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 KARSP1-201ENST00000451871 1752 ntBASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CUEDC1Q9NWM3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms