Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AL603750.1-201ENST00000624216 1717 ntBASIC6.05□□□□□ -1.44
VIPAS39Q9H9C1 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.05□□□□□ -1.44
VIPAS39Q9H9C1 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VIPAS39Q9H9C1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
VIPAS39Q9H9C1 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC139426.3-201ENST00000605648 2059 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 OR10R3P-201ENST00000361688 942 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC096921.1-201ENST00000411661 375 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC091492.1-201ENST00000419844 272 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AL359633.1-201ENST00000421403 310 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 RN7SL868P-201ENST00000485915 303 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 OR4D12P-201ENST00000509361 911 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 DPPA3P2-202ENST00000557188 1219 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC106730.2-201ENST00000566641 540 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AL157762.1-201ENST00000619612 415 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC005514.1-201ENST00000623521 208 ntBASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VIPAS39Q9H9C1 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 RNA5SP427-201ENST00000365323 119 ntBASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 SOD1P1-201ENST00000407803 440 ntBASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 GTF2IP14-201ENST00000441415 586 ntBASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 RPL6P24-201ENST00000445338 864 ntBASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 AC025271.1-201ENST00000485045 429 ntBASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 COX6B1P2-201ENST00000489624 230 ntBASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 VDAC2P2-201ENST00000544463 901 ntBASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VIPAS39Q9H9C1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
VIPAS39Q9H9C1 FBXL21-201ENST00000297158 1305 ntBASIC6.02□□□□□ -1.45
VIPAS39Q9H9C1 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VIPAS39Q9H9C1 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
VIPAS39Q9H9C1 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VIPAS39Q9H9C1 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VIPAS39Q9H9C1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms