Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 TRIM53CP-201ENST00000531490 1354 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AL050335.1-201ENST00000396909 869 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 CXADRP1-201ENST00000398098 1095 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 RN7SKP146-201ENST00000410242 334 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 RN7SKP91-201ENST00000410852 288 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AL512661.1-201ENST00000434586 1253 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC064862.5-201ENST00000440618 334 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 MTND1P31-201ENST00000449206 961 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AL358876.1-201ENST00000453364 1075 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 RN7SL492P-201ENST00000460700 295 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 RPL7AP23-201ENST00000482625 776 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 NPM1P29-201ENST00000483112 803 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC015864.1-201ENST00000496512 544 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AL158068.1-201ENST00000506116 616 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 RN7SKP67-201ENST00000515905 235 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 OR56A7P-201ENST00000524865 941 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC092868.3-201ENST00000560515 784 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC010547.7-201ENST00000570323 333 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AL049840.5-201ENST00000602827 552 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 MIR7109-201ENST00000613748 65 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 CXADRP3-202ENST00000617265 1100 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC005277.2-201ENST00000617898 390 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC009039.2-201ENST00000624524 529 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AL121936.2-201ENST00000641935 662 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 HSPD1P1-201ENST00000503199 1726 ntBASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
AMBRA1Q9C0C7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 CUL4AP1-201ENST00000514750 1863 ntBASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 RNA5SP176-201ENST00000390956 110 ntBASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 ST13P16-201ENST00000401760 781 ntBASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 RPLP1P10-201ENST00000413972 339 ntBASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 PCNPP4-201ENST00000414817 517 ntBASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 RPS17P17-201ENST00000419392 409 ntBASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 RPS10P21-201ENST00000430654 475 ntBASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 PFN1P11-201ENST00000445829 389 ntBASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 SLC25A51P1-201ENST00000468432 871 ntBASIC6.09□□□□□ -1.43
AMBRA1Q9C0C7 RN7SL390P-201ENST00000470634 284 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms