Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 AC092651.1-201ENST00000426110 312 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 PFN1P11-201ENST00000445829 389 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM4Q9C037 RPL26P30-201ENST00000453533 435 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 RN7SL216P-201ENST00000471607 298 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 AC114728.1-201ENST00000488289 483 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 ASNSP4-201ENST00000511103 447 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 AL445383.1-201ENST00000554689 874 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM4Q9C037 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 AC103703.1-201ENST00000634783 663 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 AC079776.5-201ENST00000641920 211 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM4Q9C037 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM4Q9C037 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM4Q9C037 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM4Q9C037 AP001157.1-201ENST00000550837 2339 ntBASIC6.25□□□□□ -1.41
TRIM4Q9C037 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM4Q9C037 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
TRIM4Q9C037 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 LINC01616-201ENST00000561816 2280 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 AC104966.1-201ENST00000467010 1464 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 RNA5SP140-201ENST00000364524 92 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 MIR188-201ENST00000385034 86 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 AL359694.1-201ENST00000403247 604 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 BMS1P13-201ENST00000417301 885 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 CYCSP52-201ENST00000422857 310 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 AL354766.1-201ENST00000423396 542 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 AL590399.2-201ENST00000427536 309 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 BMS1P10-201ENST00000443754 1120 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 AC026774.2-201ENST00000513990 1098 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 IGLV3-6-201ENST00000523937 250 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 SNRPCP6-201ENST00000528310 210 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 AC124916.2-201ENST00000604416 224 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 AC016590.3-201ENST00000611171 753 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM4Q9C037 PSMC1P6-201ENST00000477233 1319 ntBASIC6.24□□□□□ -1.41
TRIM4Q9C037 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM4Q9C037 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TRIM4Q9C037 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 AC068870.3-201ENST00000625077 2536 ntBASIC6.23□□□□□ -1.41
TRIM4Q9C037 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM4Q9C037 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms