Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 MIR99A-201ENST00000384906 81 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 LDHAP5-201ENST00000394996 622 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AL050335.1-201ENST00000396909 869 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC092570.3-201ENST00000420113 693 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AL139415.1-201ENST00000424862 352 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AL589794.1-201ENST00000424971 390 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AL022324.2-201ENST00000434827 780 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC004854.1-201ENST00000440356 349 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC022080.2-201ENST00000452932 533 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 snoU13.29-201ENST00000459370 104 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC016687.1-201ENST00000482574 353 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC092824.1-201ENST00000483524 576 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC140063.1-201ENST00000541343 259 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 YWHAZP1-201ENST00000556286 722 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC005632.2-201ENST00000564271 828 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 MTATP6P24-201ENST00000576835 677 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AL078623.1-201ENST00000602702 907 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC068620.3-201ENST00000602749 560 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 OR51C1P-201ENST00000608504 942 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 AP002512.4-202ENST00000641599 4530 ntBASIC5.96□□□□□ -1.46
SNX18Q96RF0 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SNX18Q96RF0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX18Q96RF0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AC005332.9-201ENST00000620266 2921 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 GTF2IP4-201ENST00000453092 2054 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX18Q96RF0 MIR551B-201ENST00000384984 96 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNX18Q96RF0 AF228730.1-201ENST00000397972 663 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 AL023284.3-201ENST00000407767 334 ntBASIC5.95□□□□□ -1.46
SNX18Q96RF0 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms