Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AL138693.1-201ENST00000622219 129 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC005514.1-201ENST00000623521 208 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC016583.1-201ENST00000624221 2431 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 FDPSP5-201ENST00000399474 1057 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 EEF1GP6-201ENST00000402309 905 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 RN7SKP279-201ENST00000411383 298 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 RPL18AP14-201ENST00000417685 526 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 MED28P4-201ENST00000433137 572 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 MTND2P40-201ENST00000436718 841 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 UOX-201ENST00000471089 899 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 TRBV5-2-201ENST00000489095 273 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AC069304.1-201ENST00000491593 704 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AC093870.1-201ENST00000506837 213 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AC137549.1-201ENST00000514243 533 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 OR8A2P-201ENST00000528631 952 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AC015674.1-201ENST00000578482 267 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 RN7SL426P-201ENST00000579106 295 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AF186192.2-204ENST00000581667 524 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 RPS4XP21-201ENST00000603814 750 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 SNORA74.4-201ENST00000607595 199 ntBASIC4.5□□□□□ -1.69
AP1S3Q96PC3 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
AP1S3Q96PC3 AL353743.3-201ENST00000442109 1468 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 SLC2A3P4-201ENST00000521259 1471 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AL049869.1-201ENST00000556933 1402 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AC005702.3-201ENST00000585345 1447 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 RNA5SP140-201ENST00000364524 92 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 RN7SKP191-201ENST00000364713 306 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 SNORA43.1-201ENST00000364863 140 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 MICG-208ENST00000416822 132 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 NPM1P18-201ENST00000434232 732 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 RPS3AP38-201ENST00000435889 763 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 RPS19P6-201ENST00000441327 433 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AL353803.3-201ENST00000444641 335 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AL020997.1-201ENST00000446554 349 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 MORF4-201ENST00000447135 971 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 USP9YP2-201ENST00000504503 1000 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AC010409.2-201ENST00000505780 478 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 GLUD1P3-202ENST00000508551 200 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 USP9YP1-201ENST00000513521 1002 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
AP1S3Q96PC3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms