Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR7159-201ENST00000620587 66 ntBASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 AC021766.1-201ENST00000624404 741 ntBASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 AC068213.1-201ENST00000625124 226 ntBASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 CLUHP10-201ENST00000631979 980 ntBASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 AC004158.1-201ENST00000564508 4319 ntBASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 AC096921.2-201ENST00000561507 1916 ntBASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 AL136984.1-201ENST00000607611 1893 ntBASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 AP000473.2-201ENST00000602659 1537 ntBASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP4Q8N3C7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC004014.2-201ENST00000623718 5122 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 HMGA1P8-201ENST00000414130 321 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AL354868.1-201ENST00000417077 482 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC128677.1-201ENST00000436016 442 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 NPM1P23-201ENST00000440193 849 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AL034369.1-201ENST00000453808 477 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC108751.3-201ENST00000461814 1020 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC022730.1-201ENST00000473114 568 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC015524.1-201ENST00000491585 472 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC008055.1-201ENST00000547032 609 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 NPIPB1P-202ENST00000588786 828 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AP001267.4-201ENST00000602598 545 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 U91328.4-201ENST00000608919 517 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AL359742.1-201ENST00000622497 540 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AC116667.2-201ENST00000641075 823 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 HDAC1P2-201ENST00000453661 1398 ntBASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP4Q8N3C7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.48
CLIP4Q8N3C7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 MT-RNR1-201ENST00000389680 954 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AC003045.1-201ENST00000398779 713 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 RPS7P14-201ENST00000426405 583 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 OR6R1P-201ENST00000431838 940 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AK3P5-201ENST00000432033 519 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 WDR82P2-201ENST00000444540 928 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 MORF4-201ENST00000447135 971 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 COX4I1P2-201ENST00000447446 547 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms