Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC005261.4-201ENST00000600047 1385 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC053481.2-202ENST00000582394 1500 ntBASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NPAS4Q8IUM7 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AOX2P-204ENST00000487742 3284 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 RPL24P4-201ENST00000326586 421 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 Y_RNA.465-201ENST00000384293 102 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC026310.1-201ENST00000396004 378 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AL359715.1-201ENST00000404330 555 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC234781.4-201ENST00000419384 244 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 DPY19L1P2-201ENST00000426647 915 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 CNOT7P1-201ENST00000429006 852 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 YWHAEP5-201ENST00000431545 765 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 FTH1P16-201ENST00000435241 552 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC073648.4-201ENST00000442655 781 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 CUBNP2-201ENST00000443534 1139 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 RPS18P1-201ENST00000447840 458 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 NPM1P19-201ENST00000450070 712 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC099670.1-201ENST00000455141 783 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 NECAP1P2-201ENST00000455668 727 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC107015.1-201ENST00000466902 747 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC091959.2-201ENST00000477363 321 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 PPP1R2P6-201ENST00000478565 588 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 R3HDM2P1-201ENST00000505381 1960 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC022296.2-201ENST00000512424 202 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 RN7SKP183-201ENST00000517169 324 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 PDCL2P2-201ENST00000533651 189 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC022507.1-201ENST00000548349 1505 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC107958.1-201ENST00000556576 290 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC021755.1-201ENST00000559747 1447 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AADACP1-206ENST00000561502 1193 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 MIR3157-201ENST00000578688 85 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 MIR5708-201ENST00000579723 85 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 DUXAP11-201ENST00000603858 526 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC004890.3-201ENST00000605566 1095 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC063962.1-201ENST00000608199 521 ntBASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
NPAS4Q8IUM7 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
NPAS4Q8IUM7 LINC02035-201ENST00000610128 5476 ntBASIC7.65□□□□□ -1.19
NPAS4Q8IUM7 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms