Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ELOCP4-201ENST00000420090 333 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC002366.1-201ENST00000446186 1190 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 RPSAP54-201ENST00000454001 886 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 APOOP2-201ENST00000461561 539 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 RN7SL333P-201ENST00000476398 297 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 GAPDHP31-201ENST00000509325 1014 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC009902.1-201ENST00000519351 183 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 PCNAP4-201ENST00000532690 730 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC073913.2-201ENST00000541512 145 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 RRN3P3-201ENST00000549207 578 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC034105.2-201ENST00000561866 238 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 SOD1P2-201ENST00000563903 451 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 MIR744-201ENST00000578242 98 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC011840.5-201ENST00000582125 771 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC026898.1-201ENST00000586404 571 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 OR1X1P-201ENST00000606159 931 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC062037.2-201ENST00000610137 73 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AL731566.2-201ENST00000618971 317 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AL133384.2-201ENST00000623755 2954 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 SLC2A3P2-201ENST00000331747 1480 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC024560.2-201ENST00000507981 1497 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 LINC00284-202ENST00000439707 2521 ntTSL 5 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 SAMMSON-213ENST00000641336 1521 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 AC007485.2-201ENST00000623493 1667 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 IPO7P2-201ENST00000451446 1750 ntBASIC8.94□□□□□ -0.98
VARS2Q5ST30 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC8.94□□□□□ -0.98
VARS2Q5ST30 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
VARS2Q5ST30 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 AP001527.1-201ENST00000566440 1957 ntBASIC8.93□□□□□ -0.98
VARS2Q5ST30 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 RPA3-203ENST00000401447 414 ntTSL 3 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 MRPL50P2-201ENST00000416821 482 ntBASIC8.93□□□□□ -0.98
VARS2Q5ST30 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 PPIAP25-201ENST00000420177 540 ntBASIC8.93□□□□□ -0.98
VARS2Q5ST30 PIGFP2-201ENST00000421400 651 ntBASIC8.93□□□□□ -0.98
VARS2Q5ST30 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VARS2Q5ST30 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 AC108448.2-201ENST00000431546 730 ntBASIC8.93□□□□□ -0.98
VARS2Q5ST30 MYO5BP3-201ENST00000431872 1279 ntBASIC8.93□□□□□ -0.98
VARS2Q5ST30 RPL36AP53-201ENST00000432891 316 ntBASIC8.93□□□□□ -0.98
VARS2Q5ST30 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8.93□□□□□ -0.98
VARS2Q5ST30 HMGB1P7-201ENST00000450921 612 ntBASIC8.93□□□□□ -0.98
VARS2Q5ST30 TXNP3-201ENST00000454560 301 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms