Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LIMK1P53667 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.29□□□□□ -1.4
LIMK1P53667 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIMK1P53667 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.29□□□□□ -1.4
LIMK1P53667 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
LIMK1P53667 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 CR382285.2-201ENST00000624662 1495 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.28□□□□□ -1.4
LIMK1P53667 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
LIMK1P53667 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LIMK1P53667 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.28□□□□□ -1.4
LIMK1P53667 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 AL929601.4-201ENST00000613011 1341 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.28□□□□□ -1.4
LIMK1P53667 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 AP001284.1-201ENST00000528393 2118 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK1P53667 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LIMK1P53667 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LIMK1P53667 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
LIMK1P53667 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.28□□□□□ -1.4
LIMK1P53667 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.28□□□□□ -1.4
LIMK1P53667 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK1P53667 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LIMK1P53667 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK1P53667 AL353662.1-201ENST00000439099 327 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.28□□□□□ -1.4
LIMK1P53667 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.28□□□□□ -1.4
LIMK1P53667 AL445665.1-202ENST00000452436 324 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 SNX18P26-201ENST00000458433 740 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 RN7SL610P-201ENST00000463845 291 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 RPL5P14-201ENST00000494197 878 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.28□□□□□ -1.4
LIMK1P53667 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 Y_RNA.667-201ENST00000516212 107 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 RNU4-18P-201ENST00000516751 149 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.28□□□□□ -1.4
LIMK1P53667 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK1P53667 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.28□□□□□ -1.4
LIMK1P53667 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK1P53667 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.28□□□□□ -1.4
LIMK1P53667 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 OR8G7P-201ENST00000616658 848 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 AC005277.2-201ENST00000617898 390 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.28□□□□□ -1.4
LIMK1P53667 AC073869.7-201ENST00000640874 297 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 TATDN2P3-201ENST00000452855 3665 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.28□□□□□ -1.4
LIMK1P53667 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.28□□□□□ -1.4
LIMK1P53667 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LIMK1P53667 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.28□□□□□ -1.4
LIMK1P53667 AC009120.2-204ENST00000621548 2032 ntBASIC6.28□□□□□ -1.4
LIMK1P53667 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.28□□□□□ -1.4
LIMK1P53667 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIMK1P53667 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 AC119674.1-204ENST00000641348 1343 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.27□□□□□ -1.41
LIMK1P53667 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
LIMK1P53667 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.27□□□□□ -1.41
LIMK1P53667 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LIMK1P53667 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.27□□□□□ -1.41
LIMK1P53667 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.27□□□□□ -1.41
LIMK1P53667 CRYGGP-201ENST00000443337 145 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.27□□□□□ -1.41
LIMK1P53667 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 AP002371.1-201ENST00000463604 433 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms