Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SMARCA2P51531 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMARCA2P51531 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SMARCA2P51531 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC10.38□□□□□ -0.75
SMARCA2P51531 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SMARCA2P51531 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC10.38□□□□□ -0.75
SMARCA2P51531 NENFP1-201ENST00000419476 466 ntBASIC10.38□□□□□ -0.75
SMARCA2P51531 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC10.38□□□□□ -0.75
SMARCA2P51531 AC139365.2-201ENST00000517972 253 ntBASIC10.38□□□□□ -0.75
SMARCA2P51531 KCTD9P4-201ENST00000526766 1166 ntBASIC10.38□□□□□ -0.75
SMARCA2P51531 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC10.38□□□□□ -0.75
SMARCA2P51531 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMARCA2P51531 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC10.38□□□□□ -0.75
SMARCA2P51531 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC10.38□□□□□ -0.75
SMARCA2P51531 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SMARCA2P51531 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA2P51531 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA2P51531 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA2P51531 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC10.37□□□□□ -0.75
SMARCA2P51531 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SMARCA2P51531 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC10.37□□□□□ -0.75
SMARCA2P51531 RNA5SP319-201ENST00000362768 119 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 AL139128.1-201ENST00000413921 941 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 RPL7L1P9-201ENST00000431298 745 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 AL022237.1-201ENST00000446663 358 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 AL035090.1-201ENST00000454835 332 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 BZW1P1-201ENST00000454901 1240 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 AC090142.2-201ENST00000483263 416 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 AC090638.1-201ENST00000498296 909 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC10.37□□□□□ -0.75
SMARCA2P51531 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC10.37□□□□□ -0.75
SMARCA2P51531 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC10.37□□□□□ -0.75
SMARCA2P51531 OR1F2P-201ENST00000570470 933 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 AC012616.1-201ENST00000600294 197 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 AL118522.2-201ENST00000616045 615 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC10.37□□□□□ -0.75
SMARCA2P51531 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA2P51531 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA2P51531 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SMARCA2P51531 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA2P51531 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC10.37□□□□□ -0.75
SMARCA2P51531 PARP4P1-201ENST00000435945 2337 ntBASIC10.37□□□□□ -0.75
SMARCA2P51531 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA2P51531 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SMARCA2P51531 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA2P51531 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA2P51531 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
SMARCA2P51531 RNA5SP333-201ENST00000363466 118 ntBASIC10.36□□□□□ -0.75
SMARCA2P51531 RNA5SP334-201ENST00000364825 118 ntBASIC10.36□□□□□ -0.75
SMARCA2P51531 MYL6P5-201ENST00000412707 459 ntBASIC10.36□□□□□ -0.75
SMARCA2P51531 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC10.36□□□□□ -0.75
SMARCA2P51531 AC103563.5-201ENST00000455643 364 ntBASIC10.36□□□□□ -0.75
SMARCA2P51531 RPL38P3-201ENST00000484463 213 ntBASIC10.36□□□□□ -0.75
SMARCA2P51531 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
SMARCA2P51531 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC10.36□□□□□ -0.75
SMARCA2P51531 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC10.36□□□□□ -0.75
SMARCA2P51531 FBXL21-201ENST00000297158 1305 ntBASIC10.36□□□□□ -0.75
SMARCA2P51531 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA2P51531 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC10.36□□□□□ -0.75
SMARCA2P51531 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SMARCA2P51531 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC10.36□□□□□ -0.75
SMARCA2P51531 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA2P51531 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC10.36□□□□□ -0.75
SMARCA2P51531 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA2P51531 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SMARCA2P51531 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA2P51531 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SMARCA2P51531 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC10.35□□□□□ -0.75
SMARCA2P51531 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA2P51531 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC10.35□□□□□ -0.75
SMARCA2P51531 RPS26P13-201ENST00000419030 330 ntBASIC10.35□□□□□ -0.75
SMARCA2P51531 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC10.35□□□□□ -0.75
SMARCA2P51531 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC10.35□□□□□ -0.75
SMARCA2P51531 AC133644.2-201ENST00000608142 540 ntBASIC10.35□□□□□ -0.75
SMARCA2P51531 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC10.35□□□□□ -0.75
SMARCA2P51531 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA2P51531 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SMARCA2P51531 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SMARCA2P51531 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA2P51531 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA2P51531 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC10.35□□□□□ -0.75
SMARCA2P51531 ERG-202ENST00000398897 4651 ntTSL 5 BASIC10.35□□□□□ -0.75
SMARCA2P51531 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA2P51531 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC10.35□□□□□ -0.75
SMARCA2P51531 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SMARCA2P51531 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC10.35□□□□□ -0.75
SMARCA2P51531 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC10.35□□□□□ -0.75
SMARCA2P51531 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC10.35□□□□□ -0.75
SMARCA2P51531 AC006335.2-201ENST00000437993 330 ntBASIC10.35□□□□□ -0.75
SMARCA2P51531 AC009220.1-201ENST00000451614 275 ntBASIC10.35□□□□□ -0.75
SMARCA2P51531 RN7SL165P-201ENST00000477476 291 ntBASIC10.35□□□□□ -0.75
SMARCA2P51531 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC10.35□□□□□ -0.75
SMARCA2P51531 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC10.35□□□□□ -0.75
SMARCA2P51531 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC10.35□□□□□ -0.75
SMARCA2P51531 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC10.35□□□□□ -0.75
SMARCA2P51531 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA2P51531 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMARCA2P51531 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMARCA2P51531 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMARCA2P51531 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms