Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
THBS1P07996 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC7.36□□□□□ -1.23
THBS1P07996 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.36□□□□□ -1.23
THBS1P07996 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.36□□□□□ -1.23
THBS1P07996 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.36□□□□□ -1.23
THBS1P07996 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC7.36□□□□□ -1.23
THBS1P07996 ATP5F1P7-201ENST00000567330 760 ntBASIC7.36□□□□□ -1.23
THBS1P07996 AC105275.2-201ENST00000567907 711 ntBASIC7.36□□□□□ -1.23
THBS1P07996 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.36□□□□□ -1.23
THBS1P07996 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.36□□□□□ -1.23
THBS1P07996 AC104117.5-201ENST00000606195 547 ntBASIC7.36□□□□□ -1.23
THBS1P07996 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.36□□□□□ -1.23
THBS1P07996 AC098614.4-201ENST00000607601 462 ntBASIC7.36□□□□□ -1.23
THBS1P07996 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC7.36□□□□□ -1.23
THBS1P07996 FAM74A6-203ENST00000615956 481 ntBASIC7.36□□□□□ -1.23
THBS1P07996 OR8G7P-201ENST00000616658 848 ntBASIC7.36□□□□□ -1.23
THBS1P07996 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.36□□□□□ -1.23
THBS1P07996 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.36□□□□□ -1.23
THBS1P07996 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.36□□□□□ -1.23
THBS1P07996 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.36□□□□□ -1.23
THBS1P07996 AC108724.2-201ENST00000634593 290 ntBASIC7.36□□□□□ -1.23
THBS1P07996 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
THBS1P07996 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.36□□□□□ -1.23
THBS1P07996 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
THBS1P07996 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
THBS1P07996 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.36□□□□□ -1.23
THBS1P07996 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
THBS1P07996 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.36□□□□□ -1.23
THBS1P07996 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
THBS1P07996 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
THBS1P07996 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
THBS1P07996 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
THBS1P07996 PHF2P2-202ENST00000444553 2865 ntBASIC7.36□□□□□ -1.23
THBS1P07996 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.36□□□□□ -1.23
THBS1P07996 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.36□□□□□ -1.23
THBS1P07996 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
THBS1P07996 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
THBS1P07996 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.36□□□□□ -1.23
THBS1P07996 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
THBS1P07996 RARSP1-201ENST00000542842 1418 ntBASIC7.35□□□□□ -1.23
THBS1P07996 AC087501.5-201ENST00000607496 2374 ntBASIC7.35□□□□□ -1.23
THBS1P07996 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.35□□□□□ -1.23
THBS1P07996 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.35□□□□□ -1.23
THBS1P07996 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.35□□□□□ -1.23
THBS1P07996 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
THBS1P07996 AC097634.1-201ENST00000604491 2467 ntBASIC7.35□□□□□ -1.23
THBS1P07996 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
THBS1P07996 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
THBS1P07996 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
THBS1P07996 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.35□□□□□ -1.23
THBS1P07996 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
THBS1P07996 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
THBS1P07996 OR7E101P-201ENST00000400428 513 ntBASIC7.35□□□□□ -1.23
THBS1P07996 AL161787.1-201ENST00000401543 174 ntBASIC7.35□□□□□ -1.23
THBS1P07996 SNORD3J-201ENST00000408473 190 ntBASIC7.35□□□□□ -1.23
THBS1P07996 PIGPP2-201ENST00000411569 458 ntBASIC7.35□□□□□ -1.23
THBS1P07996 MTCO3P12-201ENST00000416718 547 ntBASIC7.35□□□□□ -1.23
THBS1P07996 OR5W1P-201ENST00000423705 938 ntBASIC7.35□□□□□ -1.23
THBS1P07996 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.35□□□□□ -1.23
THBS1P07996 VN1R20P-201ENST00000425215 966 ntBASIC7.35□□□□□ -1.23
THBS1P07996 MTCO2P12-201ENST00000427426 682 ntBASIC7.35□□□□□ -1.23
THBS1P07996 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.35□□□□□ -1.23
THBS1P07996 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.35□□□□□ -1.23
THBS1P07996 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.35□□□□□ -1.23
THBS1P07996 FECHP1-201ENST00000431896 1214 ntBASIC7.35□□□□□ -1.23
THBS1P07996 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.35□□□□□ -1.23
THBS1P07996 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.35□□□□□ -1.23
THBS1P07996 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.35□□□□□ -1.23
THBS1P07996 HMGB3P9-201ENST00000441799 583 ntBASIC7.35□□□□□ -1.23
THBS1P07996 OR7H1P-201ENST00000448965 922 ntBASIC7.35□□□□□ -1.23
THBS1P07996 AC108463.1-201ENST00000450258 347 ntBASIC7.35□□□□□ -1.23
THBS1P07996 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.35□□□□□ -1.23
THBS1P07996 AL033528.1-201ENST00000453780 140 ntBASIC7.35□□□□□ -1.23
THBS1P07996 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.35□□□□□ -1.23
THBS1P07996 XACT-201ENST00000468762 497 ntTSL 5 BASIC7.35□□□□□ -1.23
THBS1P07996 AC022447.3-201ENST00000506865 495 ntBASIC7.35□□□□□ -1.23
THBS1P07996 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.35□□□□□ -1.23
THBS1P07996 AC009646.1-201ENST00000510455 318 ntBASIC7.35□□□□□ -1.23
THBS1P07996 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
THBS1P07996 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.35□□□□□ -1.23
THBS1P07996 RNU7-179P-201ENST00000516608 68 ntBASIC7.35□□□□□ -1.23
THBS1P07996 RN7SKP2-201ENST00000517003 319 ntBASIC7.35□□□□□ -1.23
THBS1P07996 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
THBS1P07996 PIGFP1-201ENST00000519180 653 ntBASIC7.35□□□□□ -1.23
THBS1P07996 OR5AN2P-201ENST00000534535 896 ntBASIC7.35□□□□□ -1.23
THBS1P07996 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.35□□□□□ -1.23
THBS1P07996 AL109628.2-201ENST00000554037 201 ntBASIC7.35□□□□□ -1.23
THBS1P07996 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.35□□□□□ -1.23
THBS1P07996 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7.35□□□□□ -1.23
THBS1P07996 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms